Best TWAS P=4.1e-08 · Best GWAS P=1.04e-06 conditioned to 0.275
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CASKIN1 | 0.02 | 0.00 | blup | 38 | 0.01 | 0.0450 | 4.7 | -5.5 | 4.1e-08 | -0.76 | 0.01 | 0.62 | TRUE |
| 2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | C16orf79 | 0.05 | 0.01 | lasso | 4 | 0.02 | 0.0015 | 4.7 | -5.2 | 1.7e-07 | -0.79 | 0.01 | 0.86 | FALSE |