Best TWAS P=6.28e-08 · Best GWAS P=2.95e-06 conditioned to 0.673
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Colon Adenocarcinoma | TSSK6 | 0.07 | 0.02 | blup | 32 | 0.04 | 2.9e-03 | 4.4 | 5.4 | 6.3e-08 | 0.90 | 0.01 | 0.67 | TRUE |
| 2 | The Cancer Genome Atlas | Lung Adenocarcinoma | YJEFN3 | 0.03 | 0.03 | blup | 32 | 0.02 | 3.0e-03 | 4.4 | -5.2 | 1.8e-07 | -0.94 | 0.01 | 0.82 | FALSE |
| 3 | The Cancer Genome Atlas | Thyroid Carcinoma | YJEFN3 | 0.08 | 0.06 | blup | 33 | 0.08 | 7.1e-08 | 4.5 | -5.1 | 2.7e-07 | -0.94 | 0.01 | 0.98 | FALSE |