Best TWAS P=1.44e-27 · Best GWAS P=3.73e-30 conditioned to NaN
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | CEP250 | 0.02 | 0.00 | blup | 344 | 0.00 | 1.0e-01 | 5.09 | -6.8 | 8.4e-12 | -0.62 | 0.23 | 0.11 | FALSE |
2 | CommonMind | Brain Pre-frontal Cortex | E2F1 | 0.06 | 0.01 | bslmm | 268 | 0.02 | 1.6e-03 | -6.55 | 7.2 | 5.7e-13 | 0.06 | 0.03 | 0.82 | TRUE |
3 | CommonMind | Brain Pre-frontal Cortex | UQCC | 0.07 | 0.04 | lasso | 2 | 0.05 | 1.4e-06 | 9.26 | -10.3 | 1.2e-24 | -0.88 | 0.15 | 0.85 | TRUE |
4 | GTEx | Adipose Subcutaneous | UQCC1 | 0.09 | 0.12 | lasso | 2 | 0.11 | 4.5e-09 | 9.56 | -9.6 | 7.0e-22 | -0.90 | 0.96 | 0.04 | FALSE |
5 | GTEx | Adipose Subcutaneous | PXMP4 | 0.08 | 0.03 | lasso | 4 | 0.02 | 6.8e-03 | -6.55 | 6.5 | 9.4e-11 | 0.01 | 0.03 | 0.70 | FALSE |
6 | GTEx | Adipose Subcutaneous | MAP1LC3A | 0.17 | 0.18 | enet | 22 | 0.19 | 2.1e-15 | 5.64 | 5.2 | 1.9e-07 | 0.24 | 0.08 | 0.92 | FALSE |
7 | GTEx | Adipose Subcutaneous | MMP24 | 0.22 | 0.13 | enet | 8 | 0.14 | 1.7e-11 | 6.73 | -6.4 | 1.5e-10 | -0.38 | 1.00 | 0.00 | FALSE |
8 | GTEx | Adipose Subcutaneous | MMP24-AS1 | 0.20 | 0.10 | lasso | 3 | 0.09 | 1.2e-07 | 6.74 | -6.7 | 2.8e-11 | -0.37 | 0.99 | 0.00 | FALSE |
9 | GTEx | Adipose Visceral Omentum | UQCC1 | 0.15 | 0.08 | lasso | 7 | 0.07 | 1.6e-04 | 9.56 | -9.4 | 4.4e-21 | -0.87 | 0.48 | 0.37 | FALSE |
10 | GTEx | Adrenal Gland | SPAG4 | 0.08 | 0.04 | lasso | 3 | 0.02 | 4.8e-02 | 5.46 | -5.5 | 3.9e-08 | -0.48 | 0.13 | 0.11 | FALSE |
11 | GTEx | Adrenal Gland | MMP24-AS1 | 0.18 | 0.04 | enet | 10 | 0.13 | 2.2e-05 | 8.69 | -9.8 | 1.6e-22 | -0.74 | 0.22 | 0.21 | FALSE |
12 | GTEx | Adrenal Gland | NCOA6 | 0.10 | 0.08 | lasso | 14 | 0.05 | 7.7e-03 | -5.57 | -5.7 | 1.0e-08 | -0.14 | 0.28 | 0.04 | FALSE |
13 | GTEx | Artery Aorta | CBFA2T2 | 0.23 | 0.11 | enet | 13 | 0.18 | 4.5e-10 | -3.45 | 5.7 | 1.5e-08 | 0.01 | 0.06 | 0.93 | FALSE |
14 | GTEx | Artery Aorta | MAP1LC3A | 0.19 | 0.22 | enet | 36 | 0.23 | 4.3e-13 | 5.66 | 5.6 | 2.7e-08 | 0.29 | 0.06 | 0.94 | FALSE |
15 | GTEx | Artery Tibial | TP53INP2 | 0.09 | 0.08 | lasso | 1 | 0.07 | 5.6e-06 | 5.39 | 5.4 | 7.0e-08 | 0.06 | 0.62 | 0.01 | FALSE |
16 | GTEx | Artery Tibial | EPB41L1 | 0.07 | 0.07 | enet | 10 | 0.07 | 1.8e-06 | 4.86 | 5.2 | 2.0e-07 | 0.39 | 0.22 | 0.74 | FALSE |
17 | GTEx | Artery Tibial | GSS | 0.06 | 0.02 | enet | 25 | 0.04 | 7.7e-04 | 5.39 | 7.5 | 5.4e-14 | 0.35 | 0.29 | 0.08 | FALSE |
18 | GTEx | Artery Tibial | MAP1LC3A | 0.13 | 0.15 | enet | 23 | 0.21 | 2.2e-16 | 5.75 | 5.6 | 2.2e-08 | 0.27 | 0.08 | 0.92 | FALSE |
19 | GTEx | Artery Tibial | MMP24 | 0.21 | 0.06 | enet | 11 | 0.06 | 8.8e-06 | 6.73 | -5.4 | 5.2e-08 | -0.31 | 0.95 | 0.00 | FALSE |
20 | GTEx | Artery Tibial | MMP24-AS1 | 0.22 | 0.10 | lasso | 3 | 0.09 | 1.9e-07 | 6.70 | -6.5 | 6.8e-11 | -0.37 | 0.99 | 0.00 | FALSE |
21 | GTEx | Brain Cerebellar Hemisphere | CEP250 | 0.51 | 0.40 | lasso | 12 | 0.36 | 4.7e-10 | 5.58 | -5.2 | 2.0e-07 | -0.58 | 0.99 | 0.01 | FALSE |
22 | GTEx | Brain Cerebellar Hemisphere | RP3-477O4.14 | 0.15 | 0.13 | lasso | 5 | 0.11 | 9.2e-04 | 5.58 | -5.6 | 1.8e-08 | -0.59 | 0.14 | 0.16 | FALSE |
23 | GTEx | Brain Cerebellum | CEP250 | 0.39 | 0.16 | enet | 28 | 0.24 | 8.8e-08 | 5.59 | -5.7 | 9.2e-09 | -0.62 | 0.98 | 0.01 | FALSE |
24 | GTEx | Brain Cerebellum | MMP24-AS1 | 0.33 | 0.18 | enet | 18 | 0.20 | 1.8e-06 | 6.74 | -7.7 | 9.2e-15 | -0.36 | 0.65 | 0.05 | FALSE |
25 | GTEx | Brain Cerebellum | CPNE1 | 0.15 | 0.01 | enet | 13 | 0.02 | 8.4e-02 | 3.68 | -6.0 | 2.6e-09 | -0.39 | 0.16 | 0.07 | FALSE |
26 | GTEx | Brain Cerebellum | RP4-614O4.12 | 0.20 | 0.05 | lasso | 5 | 0.03 | 3.7e-02 | 5.67 | -6.6 | 3.1e-11 | -0.33 | 0.15 | 0.19 | FALSE |
27 | GTEx | Brain Cortex | ERGIC3 | 0.15 | -0.01 | lasso | 6 | 0.00 | 2.8e-01 | 3.15 | 6.8 | 1.0e-11 | 0.68 | 0.12 | 0.10 | FALSE |
28 | GTEx | Brain Cortex | CEP250 | 0.14 | 0.16 | enet | 13 | 0.15 | 4.9e-05 | 5.53 | -5.7 | 9.6e-09 | -0.64 | 0.52 | 0.24 | FALSE |
29 | GTEx | Brain Cortex | MMP24-AS1 | 0.30 | 0.23 | lasso | 6 | 0.09 | 1.6e-03 | 6.70 | -5.4 | 8.0e-08 | -0.26 | 0.68 | 0.03 | FALSE |
30 | GTEx | Brain Frontal Cortex BA9 | UQCC1 | 0.16 | 0.07 | lasso | 3 | 0.08 | 3.7e-03 | 9.26 | -8.4 | 3.8e-17 | -0.80 | 0.08 | 0.38 | FALSE |
31 | GTEx | Brain Frontal Cortex BA9 | MMP24-AS1 | 0.44 | 0.28 | enet | 27 | 0.34 | 9.2e-10 | 6.70 | -6.8 | 1.4e-11 | -0.34 | 0.92 | 0.02 | FALSE |
32 | GTEx | Brain Hippocampus | E2F1 | 0.39 | 0.25 | lasso | 8 | 0.18 | 4.1e-05 | -6.75 | 6.0 | 2.2e-09 | -0.01 | 0.02 | 0.96 | FALSE |
33 | GTEx | Brain Hypothalamus | CEP250 | 0.18 | -0.01 | lasso | 9 | 0.00 | 3.4e-01 | 5.58 | -5.6 | 2.8e-08 | -0.62 | 0.11 | 0.17 | FALSE |
34 | GTEx | Brain Nucleus accumbens basal ganglia | EDEM2 | 0.17 | 0.00 | lasso | 4 | 0.00 | 2.7e-01 | 4.84 | -6.1 | 8.9e-10 | -0.40 | 0.07 | 0.35 | FALSE |
35 | GTEx | Brain Nucleus accumbens basal ganglia | CEP250 | 0.15 | 0.09 | lasso | 2 | 0.05 | 2.1e-02 | 5.58 | -5.6 | 2.0e-08 | -0.59 | 0.19 | 0.24 | FALSE |
36 | GTEx | Brain Putamen basal ganglia | E2F1 | 0.18 | 0.22 | lasso | 6 | 0.21 | 1.2e-05 | -6.75 | 6.9 | 4.2e-12 | 0.01 | 0.02 | 0.95 | TRUE |
37 | GTEx | Breast Mammary Tissue | UQCC1 | 0.10 | 0.06 | lasso | 8 | 0.08 | 5.3e-05 | -1.84 | -6.8 | 1.1e-11 | -0.66 | 0.45 | 0.30 | TRUE |
38 | GTEx | Breast Mammary Tissue | MAP1LC3A | 0.16 | 0.15 | enet | 19 | 0.14 | 1.8e-07 | -5.91 | 5.4 | 7.7e-08 | 0.25 | 0.06 | 0.94 | FALSE |
39 | GTEx | Breast Mammary Tissue | MMP24 | 0.13 | 0.08 | lasso | 4 | 0.06 | 6.4e-04 | 6.73 | -5.6 | 1.7e-08 | -0.35 | 0.11 | 0.04 | FALSE |
40 | GTEx | Breast Mammary Tissue (Male) | UQCC1 | 0.06 | 0.04 | lasso | 1 | 0.02 | 1.4e-01 | 9.86 | -9.9 | 6.3e-23 | -0.90 | 0.04 | 0.13 | FALSE |
41 | GTEx | Breast Mammary Tissue (Female) | MAP1LC3A | 0.12 | 0.05 | lasso | 10 | 0.05 | 1.0e-02 | 5.64 | 5.3 | 1.2e-07 | 0.26 | 0.07 | 0.84 | FALSE |
42 | GTEx | Breast Mammary Tissue (Female) | MMP24 | 0.09 | -0.01 | lasso | 1 | -0.01 | 6.2e-01 | 6.73 | -6.7 | 1.7e-11 | -0.37 | 0.04 | 0.05 | FALSE |
43 | GTEx | Cells EBV-transformed lymphocytes | PHF20 | 0.30 | -0.01 | enet | 13 | 0.04 | 2.3e-02 | 1.79 | -5.3 | 1.2e-07 | -0.28 | 0.06 | 0.10 | FALSE |
44 | GTEx | Cells EBV-transformed lymphocytes | PROCR | 0.19 | 0.05 | enet | 25 | 0.09 | 7.3e-04 | 3.20 | 7.2 | 5.7e-13 | 0.58 | 0.09 | 0.23 | FALSE |
45 | GTEx | Cells EBV-transformed lymphocytes | NCOA6 | 0.11 | 0.06 | enet | 15 | 0.06 | 3.9e-03 | 4.64 | -6.4 | 1.2e-10 | -0.31 | 0.24 | 0.09 | FALSE |
46 | GTEx | Cells Transformed fibroblasts | EDEM2 | 0.08 | 0.02 | lasso | 5 | 0.03 | 1.8e-03 | 0.38 | -6.4 | 1.9e-10 | -0.67 | 0.41 | 0.16 | FALSE |
47 | GTEx | Cells Transformed fibroblasts | UQCC1 | 0.23 | 0.24 | lasso | 8 | 0.25 | 9.4e-19 | 9.56 | -9.2 | 3.3e-20 | -0.88 | 1.00 | 0.00 | FALSE |
48 | GTEx | Cells Transformed fibroblasts | MAP1LC3A | 0.07 | 0.07 | enet | 19 | 0.06 | 3.4e-05 | 5.77 | 6.0 | 2.0e-09 | 0.28 | 0.07 | 0.93 | FALSE |
49 | GTEx | Cells Transformed fibroblasts | MMP24 | 0.11 | 0.03 | enet | 11 | 0.04 | 8.5e-04 | 6.73 | -6.2 | 4.7e-10 | -0.40 | 0.76 | 0.07 | TRUE |
50 | GTEx | Cells Transformed fibroblasts | MMP24-AS1 | 0.15 | 0.04 | lasso | 2 | 0.04 | 8.3e-04 | 6.73 | -6.4 | 2.2e-10 | -0.39 | 0.77 | 0.08 | FALSE |
51 | GTEx | Colon Sigmoid | TP53INP2 | 0.12 | 0.09 | lasso | 3 | 0.06 | 2.8e-03 | -4.87 | 5.4 | 7.4e-08 | 0.09 | 0.20 | 0.04 | TRUE |
52 | GTEx | Colon Transverse | UQCC1 | 0.11 | 0.01 | lasso | 4 | 0.01 | 1.0e-01 | 7.22 | -6.5 | 8.5e-11 | -0.48 | 0.08 | 0.09 | FALSE |
53 | GTEx | Colon Transverse | MAP1LC3A | 0.15 | 0.14 | lasso | 3 | 0.09 | 3.2e-05 | 5.66 | 5.6 | 2.8e-08 | 0.22 | 0.07 | 0.93 | FALSE |
54 | GTEx | Esophagus Gastroesophageal Junction | MAP1LC3A | 0.14 | 0.09 | enet | 9 | 0.07 | 1.4e-03 | -5.87 | 5.4 | 7.1e-08 | 0.30 | 0.06 | 0.90 | FALSE |
55 | GTEx | Esophagus Mucosa | EPB41L1 | 0.26 | 0.16 | enet | 26 | 0.22 | 1.9e-14 | 4.28 | -5.5 | 3.5e-08 | -0.36 | 0.45 | 0.55 | FALSE |
56 | GTEx | Esophagus Mucosa | UQCC1 | 0.13 | 0.10 | enet | 10 | 0.07 | 1.1e-05 | 9.86 | -10.0 | 1.6e-23 | -0.89 | 0.45 | 0.54 | FALSE |
57 | GTEx | Esophagus Mucosa | E2F1 | 0.07 | 0.04 | enet | 9 | 0.03 | 5.8e-03 | -6.13 | -6.0 | 1.8e-09 | -0.05 | 0.07 | 0.81 | FALSE |
58 | GTEx | Esophagus Mucosa | MMP24 | 0.29 | 0.16 | lasso | 3 | 0.17 | 2.4e-11 | 6.73 | -6.4 | 1.4e-10 | -0.38 | 1.00 | 0.00 | FALSE |
59 | GTEx | Esophagus Mucosa | CEP250 | 0.29 | 0.00 | lasso | 9 | 0.00 | 5.3e-01 | 2.23 | 6.7 | 1.5e-11 | 0.61 | 0.06 | 0.27 | FALSE |
60 | GTEx | Esophagus Muscularis | ITCH | 0.07 | 0.02 | lasso | 3 | 0.01 | 6.3e-02 | 5.22 | -6.0 | 2.7e-09 | -0.24 | 0.08 | 0.83 | FALSE |
61 | GTEx | Lung | UQCC1 | 0.13 | 0.08 | lasso | 5 | 0.06 | 1.0e-05 | 9.56 | -9.6 | 1.1e-21 | -0.90 | 0.46 | 0.54 | FALSE |
62 | GTEx | Lung | MAP1LC3A | 0.08 | 0.09 | lasso | 2 | 0.09 | 1.6e-07 | 5.64 | 5.7 | 1.4e-08 | 0.24 | 0.07 | 0.92 | FALSE |
63 | GTEx | Lung | MMP24-AS1 | 0.13 | 0.08 | lasso | 2 | 0.07 | 3.5e-06 | 6.85 | -6.8 | 9.1e-12 | -0.38 | 0.96 | 0.01 | FALSE |
64 | GTEx | Muscle Skeletal | CBFA2T2 | 0.05 | 0.01 | enet | 15 | 0.01 | 2.0e-02 | -5.98 | 5.9 | 3.3e-09 | 0.00 | 0.07 | 0.90 | FALSE |
65 | GTEx | Muscle Skeletal | UQCC1 | 0.10 | 0.04 | enet | 19 | 0.05 | 1.3e-05 | 8.63 | -8.8 | 1.5e-18 | -0.79 | 0.64 | 0.34 | FALSE |
66 | GTEx | Muscle Skeletal | MMP24 | 0.17 | 0.08 | lasso | 4 | 0.07 | 3.1e-07 | 6.74 | -6.5 | 1.0e-10 | -0.36 | 0.99 | 0.00 | FALSE |
67 | GTEx | Muscle Skeletal | CEP250 | 0.09 | 0.04 | lasso | 9 | 0.07 | 3.6e-07 | 5.59 | -7.9 | 4.0e-15 | -0.79 | 0.98 | 0.01 | FALSE |
68 | GTEx | Muscle Skeletal | MMP24-AS1 | 0.27 | 0.06 | lasso | 3 | 0.04 | 1.3e-04 | 6.74 | -6.3 | 3.2e-10 | -0.38 | 0.59 | 0.02 | FALSE |
69 | GTEx | Muscle Skeletal | GGT7 | 0.07 | 0.02 | enet | 26 | 0.03 | 7.2e-04 | 4.59 | 5.7 | 1.2e-08 | 0.28 | 0.93 | 0.00 | FALSE |
70 | GTEx | Muscle Skeletal | ACSS2 | 0.04 | 0.04 | enet | 12 | 0.04 | 3.1e-05 | 6.23 | 6.8 | 1.1e-11 | 0.29 | 0.83 | 0.01 | FALSE |
71 | GTEx | Muscle Skeletal | EIF6 | 0.32 | 0.25 | lasso | 5 | 0.27 | 4.6e-26 | 6.84 | 6.5 | 1.1e-10 | 0.35 | 1.00 | 0.00 | FALSE |
72 | GTEx | Muscle Skeletal | NFS1 | 0.03 | 0.02 | lasso | 3 | 0.03 | 1.0e-03 | 5.93 | 7.2 | 4.8e-13 | 0.66 | 0.17 | 0.59 | FALSE |
73 | GTEx | Muscle Skeletal | RP4-614O4.11 | 0.27 | 0.22 | lasso | 5 | 0.22 | 5.7e-21 | 6.84 | 6.6 | 3.7e-11 | 0.36 | 1.00 | 0.00 | FALSE |
74 | GTEx | Nerve Tibial | UQCC1 | 0.07 | 0.04 | enet | 6 | 0.03 | 2.7e-03 | 9.59 | -9.4 | 4.8e-21 | -0.88 | 0.23 | 0.73 | FALSE |
75 | GTEx | Nerve Tibial | MAP1LC3A | 0.19 | 0.24 | enet | 18 | 0.22 | 1.0e-15 | -5.90 | 5.3 | 1.0e-07 | 0.25 | 0.06 | 0.94 | FALSE |
76 | GTEx | Nerve Tibial | RBM39 | 0.07 | 0.01 | lasso | 8 | 0.02 | 1.2e-02 | 3.79 | -5.3 | 1.2e-07 | -0.39 | 0.22 | 0.04 | FALSE |
77 | GTEx | Pancreas | MAP1LC3A | 0.06 | 0.09 | lasso | 4 | 0.08 | 3.0e-04 | 5.88 | 5.7 | 1.0e-08 | 0.26 | 0.06 | 0.90 | FALSE |
78 | GTEx | Pituitary | MAP1LC3A | 0.26 | 0.29 | enet | 19 | 0.29 | 5.9e-08 | 6.04 | 6.0 | 2.2e-09 | 0.26 | 0.05 | 0.94 | FALSE |
79 | GTEx | Skin Not Sun Exposed Suprapubic | MMP24 | 0.30 | 0.07 | lasso | 7 | 0.10 | 5.6e-06 | 2.99 | -5.6 | 2.3e-08 | -0.38 | 0.74 | 0.03 | FALSE |
80 | GTEx | Skin Not Sun Exposed Suprapubic | MMP24-AS1 | 0.13 | 0.04 | lasso | 6 | 0.04 | 3.3e-03 | 2.99 | -5.4 | 8.4e-08 | -0.37 | 0.12 | 0.09 | FALSE |
81 | GTEx | Skin Not Sun Exposed Suprapubic | EIF6 | 0.32 | 0.11 | lasso | 6 | 0.07 | 1.1e-04 | 6.84 | 7.1 | 1.3e-12 | 0.41 | 0.98 | 0.00 | FALSE |
82 | GTEx | Skin Not Sun Exposed Suprapubic | RP4-614O4.11 | 0.26 | 0.04 | lasso | 8 | 0.03 | 6.9e-03 | 6.84 | 6.8 | 7.4e-12 | 0.40 | 0.81 | 0.01 | FALSE |
83 | GTEx | Skin Sun Exposed Lower leg | ITCH | 0.04 | 0.04 | enet | 11 | 0.04 | 6.3e-04 | -5.92 | -5.3 | 1.2e-07 | -0.26 | 0.05 | 0.94 | FALSE |
84 | GTEx | Skin Sun Exposed Lower leg | UQCC1 | 0.19 | 0.13 | enet | 16 | 0.10 | 8.1e-09 | 9.59 | -8.7 | 3.2e-18 | -0.84 | 1.00 | 0.00 | FALSE |
85 | GTEx | Skin Sun Exposed Lower leg | MMP24 | 0.42 | 0.14 | lasso | 8 | 0.14 | 2.5e-11 | 2.99 | -5.2 | 1.6e-07 | -0.43 | 1.00 | 0.00 | FALSE |
86 | GTEx | Skin Sun Exposed Lower leg | EIF6 | 0.40 | 0.21 | lasso | 5 | 0.19 | 1.2e-15 | 6.84 | 8.3 | 1.0e-16 | 0.48 | 1.00 | 0.00 | FALSE |
87 | GTEx | Skin Sun Exposed Lower leg | RP4-614O4.11 | 0.37 | 0.18 | lasso | 3 | 0.16 | 6.1e-13 | 6.84 | 8.0 | 1.8e-15 | 0.44 | 1.00 | 0.00 | FALSE |
88 | GTEx | Stomach | UQCC1 | 0.09 | 0.14 | lasso | 2 | 0.15 | 1.9e-07 | 9.56 | -8.9 | 4.3e-19 | -0.86 | 0.46 | 0.39 | FALSE |
89 | GTEx | Stomach | MAP1LC3A | 0.10 | 0.04 | enet | 10 | 0.05 | 1.3e-03 | -5.90 | 6.3 | 3.3e-10 | 0.27 | 0.06 | 0.82 | FALSE |
90 | GTEx | Testis | CBFA2T2 | 0.10 | 0.07 | enet | 11 | 0.07 | 6.1e-04 | -6.55 | 6.6 | 4.1e-11 | -0.02 | 0.03 | 0.94 | FALSE |
91 | GTEx | Testis | MAP1LC3A | 0.42 | 0.38 | enet | 33 | 0.40 | 3.0e-19 | 5.89 | 5.9 | 4.8e-09 | 0.27 | 0.06 | 0.94 | FALSE |
92 | GTEx | Testis | MMP24 | 0.32 | 0.22 | lasso | 2 | 0.20 | 1.9e-09 | 6.74 | -6.7 | 2.8e-11 | -0.37 | 0.99 | 0.00 | FALSE |
93 | GTEx | Testis | MMP24-AS1 | 0.66 | 0.39 | lasso | 6 | 0.39 | 1.7e-18 | 6.74 | -6.5 | 8.0e-11 | -0.37 | 1.00 | 0.00 | FALSE |
94 | GTEx | Testis | LINC00657 | 0.08 | 0.05 | enet | 15 | 0.05 | 3.0e-03 | 3.77 | -5.5 | 4.9e-08 | -0.42 | 0.07 | 0.90 | FALSE |
95 | GTEx | Thyroid | CBFA2T2 | 0.11 | 0.05 | enet | 18 | 0.06 | 2.6e-05 | 3.68 | 5.9 | 4.8e-09 | -0.02 | 0.15 | 0.82 | FALSE |
96 | GTEx | Thyroid | TP53INP2 | 0.09 | 0.05 | lasso | 7 | 0.04 | 3.7e-04 | -4.87 | 5.7 | 1.3e-08 | 0.10 | 0.92 | 0.01 | FALSE |
97 | GTEx | Thyroid | MYH7B | 0.06 | 0.03 | enet | 15 | 0.06 | 3.6e-05 | 5.07 | 6.5 | 6.4e-11 | 0.40 | 0.85 | 0.02 | FALSE |
98 | GTEx | Thyroid | MAP1LC3A | 0.17 | 0.27 | enet | 19 | 0.26 | 2.7e-20 | 5.77 | 5.6 | 2.6e-08 | 0.25 | 0.10 | 0.90 | FALSE |
99 | GTEx | Thyroid | RP4-614O4.12 | 0.08 | 0.08 | lasso | 5 | 0.07 | 6.8e-06 | -4.50 | -6.1 | 1.1e-09 | -0.44 | 0.97 | 0.00 | FALSE |
100 | GTEx | Vagina | CPNE1 | 0.28 | 0.21 | enet | 20 | 0.34 | 1.6e-08 | 3.65 | -5.4 | 5.9e-08 | -0.32 | 0.56 | 0.06 | FALSE |
101 | GTEx | Whole Blood | MAP1LC3A | 0.05 | 0.03 | enet | 15 | 0.00 | 1.8e-01 | 5.75 | 6.5 | 1.1e-10 | 0.27 | 0.07 | 0.86 | FALSE |
102 | METSIM | Adipose | EIF6 | 0.07 | 0.02 | bslmm | 343 | 0.04 | 2.7e-07 | 2.88 | 5.8 | 5.9e-09 | 0.38 | 0.97 | 0.00 | FALSE |
103 | METSIM | Adipose | MAP1LC3A | 0.05 | 0.06 | blup | 309 | 0.06 | 7.2e-09 | 5.88 | 6.2 | 4.9e-10 | 0.25 | 0.06 | 0.94 | FALSE |
104 | METSIM | Adipose | RP3-477O4.16 | 0.07 | 0.08 | lasso | 3 | 0.07 | 1.6e-10 | 5.59 | 5.5 | 4.2e-08 | 0.63 | 1.00 | 0.00 | FALSE |
105 | METSIM | Adipose | TP53INP2 | 0.05 | 0.03 | lasso | 3 | 0.04 | 1.3e-06 | -4.87 | 5.3 | 1.3e-07 | 0.10 | 1.00 | 0.00 | FALSE |
106 | METSIM | Adipose | UQCC1 | 0.09 | 0.04 | enet | 18 | 0.05 | 1.5e-07 | 9.56 | -9.6 | 5.4e-22 | -0.90 | 0.14 | 0.86 | FALSE |
107 | NTR | Blood | UQCC | 0.01 | 0.01 | enet | 6 | 0.00 | 1.6e-02 | 9.56 | -10.1 | 9.1e-24 | -0.89 | 0.08 | 0.78 | FALSE |
108 | ROSMAP | Brain Pre-frontal Cortex | UQCC1 | 0.05 | 0.05 | lasso | 5 | 0.06 | 1.7e-08 | 9.90 | -10.2 | 1.5e-24 | -0.84 | 0.21 | 0.79 | FALSE |
109 | ROSMAP | Brain Pre-frontal Cortex | GDF5 | 0.10 | 0.13 | lasso | 2 | 0.12 | 2.9e-15 | 9.56 | 9.6 | 1.2e-21 | 0.90 | 0.83 | 0.17 | FALSE |
110 | ROSMAP | Brain Pre-frontal Cortex | CEP250 | 0.15 | 0.14 | lasso | 5 | 0.13 | 2.3e-16 | 5.63 | -5.6 | 1.6e-08 | -0.64 | 1.00 | 0.00 | FALSE |
111 | ROSMAP | Brain Pre-frontal Cortex | MMP24-AS1 | 0.46 | 0.38 | lasso | 8 | 0.38 | 7.4e-51 | 6.74 | -6.9 | 5.0e-12 | -0.36 | 1.00 | 0.00 | FALSE |
112 | YFS | Blood | CEP250 | 0.15 | 0.12 | lasso | 13 | 0.13 | 9.2e-41 | 5.67 | -5.9 | 2.8e-09 | -0.63 | 1.00 | 0.00 | FALSE |
113 | YFS | Blood | EIF6 | 0.02 | 0.00 | blup | 341 | 0.01 | 4.1e-05 | 3.97 | 5.2 | 2.4e-07 | 0.37 | 0.88 | 0.02 | FALSE |
114 | YFS | Blood | PROCR | 0.01 | 0.00 | blup | 348 | 0.01 | 3.3e-03 | 8.52 | -6.7 | 1.8e-11 | -0.70 | 0.08 | 0.75 | FALSE |
115 | YFS | Blood | TP53INP2 | 0.02 | 0.02 | lasso | 15 | 0.01 | 1.3e-05 | -4.91 | 5.2 | 2.5e-07 | 0.06 | 1.00 | 0.00 | FALSE |
116 | YFS | Blood | UQCC | 0.21 | 0.19 | lasso | 26 | 0.20 | 6.4e-64 | 9.56 | -9.1 | 1.0e-19 | -0.88 | 1.00 | 0.00 | FALSE |
117 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | MMP24 | 0.10 | 0.03 | enet | 14 | 0.05 | 5.1e-05 | 6.71 | -5.9 | 3.1e-09 | -0.34 | 0.33 | 0.13 | FALSE |
118 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | UQCC | 0.03 | 0.04 | blup | 67 | 0.03 | 2.6e-03 | 9.58 | -10.1 | 3.9e-24 | -0.91 | 0.02 | 0.91 | FALSE |
119 | The Cancer Genome Atlas | Breast Invasive Carcinoma | GGT7 | 0.02 | 0.02 | lasso | 3 | 0.02 | 2.2e-04 | 5.39 | -5.1 | 2.9e-07 | -0.09 | 0.01 | 0.92 | FALSE |
120 | The Cancer Genome Atlas | Breast Invasive Carcinoma | MMP24 | 0.04 | 0.05 | blup | 61 | 0.04 | 2.3e-09 | 6.70 | -6.4 | 2.1e-10 | -0.37 | 1.00 | 0.00 | FALSE |
121 | The Cancer Genome Atlas | Breast Invasive Carcinoma | UQCC | 0.08 | 0.11 | blup | 67 | 0.12 | 1.1e-22 | 9.86 | -9.8 | 1.4e-22 | -0.89 | 1.00 | 0.00 | FALSE |
122 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | LOC647979 | 0.05 | 0.05 | blup | 19 | 0.05 | 1.6e-03 | 3.87 | -5.3 | 1.2e-07 | -0.41 | 0.02 | 0.21 | FALSE |
123 | The Cancer Genome Atlas | Colon Adenocarcinoma | CBFA2T2 | 0.13 | 0.04 | lasso | 1 | 0.03 | 1.1e-02 | -6.74 | 6.7 | 1.6e-11 | 0.01 | 0.01 | 0.70 | FALSE |
124 | The Cancer Genome Atlas | Colon Adenocarcinoma | ERGIC3 | 0.05 | 0.03 | blup | 39 | 0.04 | 3.0e-03 | 5.09 | -5.5 | 4.3e-08 | -0.61 | 0.02 | 0.86 | FALSE |
125 | The Cancer Genome Atlas | Glioblastoma Multiforme | UQCC | 0.15 | 0.02 | blup | 67 | 0.04 | 2.0e-02 | 2.07 | -8.7 | 2.2e-18 | -0.74 | 0.02 | 0.64 | FALSE |
126 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | CEP250 | 0.02 | 0.01 | blup | 43 | 0.02 | 8.0e-04 | 5.66 | 7.7 | 1.3e-14 | 0.79 | 0.03 | 0.83 | FALSE |
127 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | UQCC | 0.05 | 0.06 | blup | 66 | 0.06 | 3.6e-07 | 8.68 | -10.0 | 2.2e-23 | -0.87 | 0.13 | 0.87 | FALSE |
128 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CEP250 | 0.03 | 0.01 | blup | 43 | 0.03 | 2.6e-04 | 11.41 | 7.4 | 1.3e-13 | 0.77 | 0.01 | 0.89 | TRUE |
129 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | FER1L4 | 0.05 | 0.06 | lasso | 5 | 0.05 | 1.2e-06 | 5.93 | -5.9 | 4.6e-09 | -0.48 | 0.01 | 0.99 | FALSE |
130 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | UQCC | 0.09 | 0.10 | blup | 67 | 0.10 | 7.2e-11 | 9.47 | -9.3 | 1.0e-20 | -0.88 | 0.97 | 0.03 | FALSE |
131 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | UQCC | 0.08 | 0.01 | lasso | 3 | 0.01 | 9.0e-02 | 8.63 | -9.3 | 1.2e-20 | -0.72 | 0.04 | 0.85 | TRUE |
132 | The Cancer Genome Atlas | Brain Lower Grade Glioma | CBFA2T2 | 0.02 | 0.01 | blup | 31 | 0.01 | 1.8e-02 | -6.67 | 6.0 | 2.0e-09 | 0.02 | 0.01 | 0.71 | FALSE |
133 | The Cancer Genome Atlas | Brain Lower Grade Glioma | EIF6 | 0.20 | 0.01 | enet | 25 | 0.04 | 1.1e-05 | 6.91 | 5.4 | 5.4e-08 | 0.39 | 0.65 | 0.08 | FALSE |
134 | The Cancer Genome Atlas | Brain Lower Grade Glioma | GDF5 | 0.09 | 0.11 | blup | 76 | 0.12 | 1.0e-13 | 9.37 | 9.2 | 5.0e-20 | 0.83 | 0.14 | 0.86 | FALSE |
135 | The Cancer Genome Atlas | Brain Lower Grade Glioma | MAP1LC3A | 0.02 | 0.03 | lasso | 3 | 0.02 | 8.3e-04 | -5.89 | 5.9 | 3.6e-09 | 0.26 | 0.02 | 0.96 | FALSE |
136 | The Cancer Genome Atlas | Brain Lower Grade Glioma | NCOA6 | 0.04 | 0.02 | blup | 65 | 0.04 | 6.1e-05 | -4.99 | -5.7 | 1.0e-08 | -0.09 | 0.08 | 0.78 | FALSE |
137 | The Cancer Genome Atlas | Brain Lower Grade Glioma | UQCC | 0.04 | 0.06 | lasso | 6 | 0.05 | 2.3e-06 | 9.59 | -9.6 | 9.3e-22 | -0.90 | 0.66 | 0.34 | FALSE |
138 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | CEP250 | 0.09 | 0.06 | lasso | 4 | 0.06 | 1.2e-03 | 5.58 | 5.4 | 7.3e-08 | 0.60 | 0.51 | 0.18 | FALSE |
139 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | MMP24 | 0.06 | 0.09 | lasso | 1 | 0.08 | 1.4e-04 | 6.74 | -6.7 | 1.6e-11 | -0.37 | 0.09 | 0.65 | FALSE |
140 | The Cancer Genome Atlas | Lung Adenocarcinoma | UQCC | 0.10 | 0.07 | enet | 10 | 0.07 | 1.5e-08 | 9.90 | -9.8 | 1.7e-22 | -0.89 | 0.09 | 0.91 | FALSE |
141 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | MMP24 | 0.04 | 0.04 | blup | 62 | 0.02 | 7.4e-04 | 6.91 | -8.1 | 3.8e-16 | -0.55 | 0.26 | 0.66 | FALSE |
142 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | UQCC | 0.07 | 0.08 | blup | 67 | 0.07 | 1.1e-08 | 9.47 | -9.4 | 5.8e-21 | -0.82 | 0.05 | 0.95 | FALSE |
143 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | GDF5 | 0.05 | 0.02 | blup | 76 | 0.04 | 1.4e-03 | 9.56 | 10.3 | 1.1e-24 | 0.89 | 0.03 | 0.91 | FALSE |
144 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | UQCC | 0.12 | 0.03 | blup | 67 | 0.09 | 1.7e-04 | 9.38 | -8.4 | 5.8e-17 | -0.83 | 0.02 | 0.89 | FALSE |
145 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | UQCC | 0.22 | 0.21 | lasso | 7 | 0.18 | 1.9e-07 | 9.38 | -9.9 | 2.6e-23 | -0.84 | 0.32 | 0.68 | FALSE |
146 | The Cancer Genome Atlas | Prostate Adenocarcinoma | CEP250 | 0.08 | 0.15 | enet | 16 | 0.15 | 3.1e-15 | 5.64 | 5.5 | 5.0e-08 | 0.63 | 1.00 | 0.00 | FALSE |
147 | The Cancer Genome Atlas | Prostate Adenocarcinoma | FAM83C | 0.16 | 0.10 | lasso | 4 | 0.11 | 2.1e-11 | 8.97 | -9.2 | 3.9e-20 | -0.58 | 0.15 | 0.85 | FALSE |
148 | The Cancer Genome Atlas | Prostate Adenocarcinoma | GDF5 | 0.05 | 0.05 | lasso | 5 | 0.04 | 7.2e-05 | 11.41 | 10.9 | 1.4e-27 | 0.95 | 0.00 | 1.00 | TRUE |
149 | The Cancer Genome Atlas | Prostate Adenocarcinoma | GGT7 | 0.05 | 0.02 | enet | 6 | 0.03 | 3.3e-04 | 4.95 | -6.0 | 2.6e-09 | -0.19 | 0.01 | 0.97 | TRUE |
150 | The Cancer Genome Atlas | Prostate Adenocarcinoma | MMP24 | 0.19 | 0.21 | enet | 7 | 0.24 | 1.6e-24 | 6.71 | -5.8 | 6.1e-09 | -0.38 | 1.00 | 0.00 | FALSE |
151 | The Cancer Genome Atlas | Prostate Adenocarcinoma | UQCC | 0.07 | 0.10 | lasso | 8 | 0.11 | 1.3e-11 | 9.37 | -9.9 | 4.1e-23 | -0.90 | 0.37 | 0.63 | FALSE |
152 | The Cancer Genome Atlas | Soft Tissue Sarcoma | UQCC | 0.07 | 0.06 | blup | 66 | 0.07 | 5.2e-05 | 9.56 | -10.3 | 1.1e-24 | -0.89 | 0.02 | 0.97 | FALSE |
153 | The Cancer Genome Atlas | Stomach Adenocarcinoma | GDF5 | 0.09 | 0.04 | enet | 13 | 0.05 | 2.4e-04 | 11.41 | 10.2 | 2.9e-24 | 0.85 | 0.00 | 0.99 | FALSE |
154 | The Cancer Genome Atlas | Stomach Adenocarcinoma | UQCC | 0.07 | 0.06 | lasso | 10 | 0.06 | 2.8e-05 | 9.26 | -9.2 | 3.4e-20 | -0.88 | 0.04 | 0.95 | FALSE |
155 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | CEP250 | 0.10 | 0.00 | blup | 43 | 0.05 | 9.8e-03 | 8.63 | 7.4 | 1.8e-13 | 0.73 | 0.01 | 0.24 | FALSE |
156 | The Cancer Genome Atlas | Thyroid Carcinoma | CEP250 | 0.05 | 0.03 | blup | 43 | 0.04 | 5.8e-05 | 5.59 | 7.5 | 6.0e-14 | 0.78 | 0.12 | 0.83 | FALSE |
157 | The Cancer Genome Atlas | Thyroid Carcinoma | FER1L4 | 0.09 | 0.05 | lasso | 3 | 0.04 | 1.9e-04 | 4.69 | 5.3 | 8.9e-08 | 0.45 | 0.19 | 0.58 | FALSE |
158 | The Cancer Genome Atlas | Thyroid Carcinoma | GDF5 | 0.02 | 0.00 | blup | 76 | 0.00 | 1.9e-01 | 9.86 | 9.0 | 2.5e-19 | 0.90 | 0.02 | 0.88 | TRUE |
159 | The Cancer Genome Atlas | Thyroid Carcinoma | ITCH | 0.04 | 0.06 | blup | 64 | 0.06 | 8.4e-07 | -6.21 | 6.2 | 4.7e-10 | 0.26 | 0.04 | 0.96 | FALSE |
160 | The Cancer Genome Atlas | Thyroid Carcinoma | UQCC | 0.15 | 0.21 | blup | 67 | 0.22 | 1.2e-20 | 9.86 | -10.5 | 5.5e-26 | -0.88 | 0.51 | 0.49 | FALSE |
161 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | UQCC | 0.13 | 0.15 | lasso | 1 | 0.11 | 7.1e-04 | 7.95 | -7.9 | 1.9e-15 | -0.74 | 0.04 | 0.65 | FALSE |