Best TWAS P=7.38e-08 · Best GWAS P=8.41e-08 conditioned to 0.208
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Lung | RP11-849F2.8 | 0.12 | 0.08 | lasso | 5 | 0.09 | 1.2e-07 | -5.0 | 5.3 | 1.4e-07 | -0.92 | 0.02 | 0.98 | FALSE |
2 | NTR | Blood | C17orf68 | 0.03 | 0.03 | lasso | 3 | 0.03 | 3.9e-11 | -5.2 | 5.4 | 7.4e-08 | -0.89 | 0.01 | 0.98 | TRUE |