TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Pack years adult smoking proportion
:
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chr10:64,531,160-65,911,294
Best TWAS P=1.18e-08 · Best GWAS P=1.54e-07 conditioned to 0.433
64.6M
64.8M
65M
65.2M
65.4M
65.6M
65.8M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Testis
JMJD1C-AS1
0.22
0.08
enet
23
0.10
3.7e-05
5.2
5.7
1.2e-08
0.85
0.03
0.96
TRUE
2
The Cancer Genome Atlas
Pancreatic Adenocarcinoma
LOC84989
0.10
0.05
blup
19
0.04
7.7e-03
5.0
5.4
8.7e-08
0.93
0.00
0.68
FALSE