TWAS
hub
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Usage
Models
Genes
Traits
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Traits
:
Body mass index (BMI)
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chr2:86,095,201-87,510,868
Best TWAS P=2.6e-10 · Best GWAS P=5.95e-11 conditioned to 0.0421
86.2M
86.4M
86.6M
86.8M
87M
87.2M
87.4M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Esophagus Muscularis
AC015971.2
0.09
0.03
lasso
6
0.05
0.00091
6.4
-6.3
2.6e-10
-0.89
0.01
0.95
TRUE
3
The Cancer Genome Atlas
Liver Hepatocellular Carcinoma
RNF103
0.06
0.02
blup
42
0.02
0.02420
-4.9
6.1
1.3e-09
0.86
0.02
0.43
FALSE
2
The Cancer Genome Atlas
Brain Lower Grade Glioma
VPS24
0.05
0.02
enet
12
0.03
0.00029
6.4
-5.2
2.1e-07
-0.65
0.00
0.98
FALSE