Best TWAS P=8.2e-10 · Best GWAS P=8.79e-10 conditioned to 0.0376
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Ovary | ARHGEF26 | 0.14 | 0.03 | enet | 15 | 0.06 | 1.4e-02 | 5.4 | 6.1 | 8.2e-10 | 0.79 | 0.07 | 0.50 | TRUE |
2 | GTEx | Spleen | DHX36 | 0.39 | 0.09 | enet | 21 | 0.34 | 2.1e-09 | -2.5 | -5.2 | 1.9e-07 | -0.67 | 0.13 | 0.85 | FALSE |