TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Body mass index (BMI)
:
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→
chr5:133,164,490-134,680,040
Best TWAS P=8.87e-11 · Best GWAS P=4.59e-13 conditioned to 7.92e-05
133.2M
133.4M
133.6M
133.8M
134M
134.2M
134.4M
134.6M
0
2
4
6
8
10
12
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
METSIM
Adipose
PHF15
0.03
0.01
bslmm
298
0.01
6.5e-03
-7.2
-6.5
8.9e-11
0.66
0.00
0.97
TRUE
2
METSIM
Adipose
SAR1B
0.06
0.02
bslmm
288
0.03
3.1e-05
2.2
6.0
2.0e-09
-0.22
0.51
0.06
FALSE
3
The Cancer Genome Atlas
Prostate Adenocarcinoma
SAR1B
0.04
0.01
enet
4
0.02
2.5e-03
-4.6
5.5
2.8e-08
-0.56
0.00
0.89
FALSE