Best TWAS P=1.28e-08 · Best GWAS P=1.78e-15 conditioned to 1.3e-09
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Adipose Visceral Omentum | RAD52 | 0.14 | 0.07 | lasso | 3 | 0.10 | 1.1e-05 | -4.8 | -5.7 | 1.3e-08 | -0.44 | 0.54 | 0.37 | TRUE |
| 2 | The Cancer Genome Atlas | Esophageal Carcinoma | RAD52 | 0.25 | 0.13 | blup | 66 | 0.19 | 1.1e-06 | 6.2 | -5.2 | 1.9e-07 | -0.61 | 0.02 | 0.96 | FALSE |