[Hub]/) : Traits : Weight :

chr11:130,038,487-131,476,599

Best TWAS P=1.57e-08 · Best GWAS P=1.56e-09 conditioned to 0.0187

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous SNX19 0.21 0.15 enet 24 0.16 2.3e-13 4.3 -5.4 6.6e-08 0.81 0.17 0.83 FALSE
2 GTEx Adrenal Gland SNX19 0.24 0.16 lasso 4 0.06 3.2e-03 4.3 -5.1 2.7e-07 0.88 0.04 0.95 FALSE
3 GTEx Brain Caudate basal ganglia SNX19 0.33 0.12 lasso 5 0.12 2.8e-04 4.3 -5.5 4.0e-08 0.92 0.03 0.94 FALSE
4 GTEx Brain Cortex SNX19 0.36 0.12 lasso 7 0.16 3.3e-05 4.1 -5.1 2.9e-07 0.92 0.02 0.97 FALSE
5 GTEx Brain Frontal Cortex BA9 SNX19 0.41 0.20 lasso 7 0.37 7.1e-11 -5.5 -5.5 2.8e-08 0.84 0.02 0.98 FALSE
6 GTEx Brain Hippocampus SNX19 0.24 0.07 enet 17 0.16 1.8e-04 -5.5 -5.1 2.7e-07 0.80 0.03 0.89 FALSE
7 GTEx Brain Hypothalamus SNX19 0.32 0.04 lasso 5 0.13 7.4e-04 4.3 -5.5 2.9e-08 0.84 0.04 0.92 FALSE
8 GTEx Esophagus Muscularis SNX19 0.31 0.18 enet 23 0.25 1.2e-15 4.3 -5.7 1.6e-08 0.85 0.02 0.98 TRUE
9 GTEx Heart Atrial Appendage SNX19 0.50 0.20 enet 32 0.32 4.9e-15 -5.5 -5.2 1.5e-07 0.72 0.02 0.98 FALSE
10 GTEx Heart Left Ventricle SNX19 0.21 0.06 lasso 4 0.05 9.7e-04 4.3 -5.4 8.5e-08 0.91 0.02 0.97 FALSE
11 GTEx Pancreas RP11-890B15.3 0.16 0.02 lasso 2 0.01 1.9e-01 -6.0 -5.6 2.3e-08 0.95 0.01 0.96 FALSE
12 GTEx Stomach SNX19 0.39 0.29 lasso 13 0.27 2.0e-13 4.3 -5.3 1.4e-07 0.86 0.23 0.77 FALSE
13 GTEx Testis SNX19 0.59 0.25 enet 24 0.38 7.1e-18 -6.0 -5.6 2.2e-08 0.86 0.00 1.00 FALSE
14 ROSMAP Brain Pre-frontal Cortex SNX19 0.41 0.49 lasso 6 0.51 2.7e-75 4.5 -5.3 1.3e-07 0.83 0.91 0.09 FALSE
15 The Cancer Genome Atlas Esophageal Carcinoma SNX19 0.15 0.08 lasso 6 0.12 1.4e-04 4.5 -5.1 2.8e-07 0.74 0.23 0.47 FALSE
16 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma SNX19 0.11 0.19 enet 15 0.24 3.2e-26 4.5 -5.2 1.6e-07 0.70 0.92 0.07 FALSE
17 The Cancer Genome Atlas Pancreatic Adenocarcinoma SNX19 0.06 0.04 blup 100 0.06 1.3e-03 3.9 -5.3 1.4e-07 0.74 0.06 0.34 FALSE