Best TWAS P=1.69e-07 · Best GWAS P=3.59e-08 conditioned to 0.00351
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Breast Mammary Tissue (Female) | RP11-165J3.6 | 0.21 | 0.02 | lasso | 3 | 0.00 | 0.230 | 5.0 | 5.2 | 2.0e-07 | -0.24 | 0.07 | 0.13 | TRUE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | PHF2 | 0.07 | 0.00 | blup | 104 | 0.01 | 0.084 | 3.2 | 5.2 | 1.7e-07 | -0.45 | 0.03 | 0.13 | TRUE |