Best TWAS P=7.28e-08 · Best GWAS P=6.41e-08 conditioned to 0.0159
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Brain Caudate basal ganglia | PTK2 | 0.28 | 0.01 | lasso | 4 | 0.09 | 0.0015 | -5.3 | 5.4 | 7.3e-08 | -0.67 | 0.04 | 0.81 | TRUE |