Best TWAS P=1.43e-08 · Best GWAS P=8.98e-09 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adipose Subcutaneous | RP11-298P3.4 | 0.09 | 0.01 | lasso | 7 | 0 | 0.19 | -5.7 | -5.7 | 1.4e-08 | 0.97 | 0.02 | 0.94 | TRUE |
2 | GTEx | Whole Blood | KL | 0.12 | 0.00 | lasso | 7 | 0 | 0.49 | -2.1 | 5.3 | 1.5e-07 | -0.65 | 0.04 | 0.73 | FALSE |