2994 significantly associated models · 645 unique genes
.
# | chr | p0 | p1 | # assoc genes | # joint genes | best TWAS P | best SNP P | cond SNP P | % var exp | joint genes |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1 | 903104 | 2362827 | 3 | 1 | 1.8e-10 | 1.5e-04 | 1.3e-04 | -2 | RP1-283E3.4 |
2 | 1 | 5988926 | 7389977 | 1 | 1 | 5.4e-08 | 1.2e-08 | 1.0e+00 | 100 | THAP3 |
3 | 1 | 7715776 | 9571422 | 2 | 1 | 3.8e-11 | 2.2e-10 | 1.0e+00 | 100 | RERE |
4 | 1 | 31494475 | 32929175 | 2 | 1 | 9.8e-09 | 8.2e-11 | 1.6e-03 | 76 | BAI2 |
5 | 1 | 42153335 | 43612919 | 2 | 2 | 4.8e-09 | 1.0e-11 | 2.8e-06 | 52 | RIMKLA ZMYND12 |
6 | 1 | 46982455 | 51180660 | 2 | 2 | 7.1e-12 | 4.0e-14 | 3.0e-04 | 77 | AGBL4 TAL1 |
7 | 1 | 61448835 | 62875313 | 1 | 1 | 1.1e-07 | 3.3e-11 | 9.1e-06 | 55 | TM2D1 |
8 | 1 | 66019891 | 67086881 | 1 | 1 | 2.3e-07 | 8.3e-09 | 6.1e-03 | 77 | PDE4B |
9 | 1 | 71163715 | 73435171 | 1 | 1 | 1.4e-13 | 3.1e-18 | 4.3e-09 | 55 | NEGR1 |
10 | 1 | 83640176 | 85162753 | 1 | 1 | 9.6e-09 | 4.2e-09 | 2.8e-03 | 74 | TTLL7 |
11 | 1 | 106906072 | 108296508 | 1 | 1 | 2.7e-09 | 1.3e-08 | 1.0e+00 | 100 | PRMT6 |
12 | 1 | 109453129 | 110931112 | 3 | 2 | 2.1e-08 | 1.4e-08 | 1.0e+00 | 100 | GNAI3 GSTM2 |
13 | 1 | 112312154 | 114367116 | 4 | 1 | 1.3e-10 | 5.0e-10 | 1.1e-01 | 94 | MOV10 |
14 | 1 | 149672809 | 151715279 | 11 | 8 | 2.5e-14 | 4.0e-19 | NaN | NaN | ANP32E ARNT ECM1 RP11-196G18.22 RP11-316M1.12 RP11-54A4.2 RPRD2 |
15 | 1 | 154956662 | 155445842 | 1 | 1 | 5.8e-08 | 1.0e-08 | 6.5e-02 | 90 | GBA |
16 | 1 | 173672799 | 174209978 | 1 | 1 | 2.7e-07 | 1.3e-05 | 7.0e-01 | 99 | RC3H1 |
17 | 1 | 177362879 | 178753162 | 1 | 1 | 2.9e-11 | 7.6e-33 | 2.3e-23 | 30 | RASAL2-AS1 |
18 | 1 | 183961643 | 185416670 | 1 | 1 | 2.5e-09 | 6.2e-09 | 1.0e-02 | 80 | EDEM3 |
19 | 1 | 201158976 | 202607593 | 3 | 1 | 1.1e-14 | 6.0e-16 | 9.4e-03 | 90 | LMOD1 |
20 | 1 | 202900734 | 204411063 | 1 | 1 | 1.6e-07 | 4.9e-09 | 8.3e-03 | 80 | ATP2B4 |
21 | 1 | 212534448 | 214147889 | 1 | 1 | 1.9e-07 | 2.5e-07 | 1.0e+00 | 100 | RPS6KC1 |
22 | 1 | 218648556 | 220479607 | 2 | 1 | 8.6e-15 | 9.2e-25 | 5.2e-12 | 55 | LYPLAL1 |
23 | 1 | 243298257 | 243910067 | 1 | 1 | 9.7e-11 | 4.0e-10 | 7.2e-02 | 92 | SDCCAG8 |
24 | 2 | 24324172 | 27649375 | 9 | 3 | 9.1e-47 | 1.3e-38 | 2.4e-01 | 99 | ADCY3 EPT1 KCNK3 |
25 | 2 | 35883253 | 37567226 | 4 | 1 | 2.4e-10 | 2.4e-10 | 1.0e+00 | 100 | FEZ2 |
26 | 2 | 46599373 | 47102655 | 1 | 1 | 2.5e-07 | 1.3e-09 | 2.2e-04 | 63 | CRIPT |
27 | 2 | 53647729 | 55231928 | 1 | 1 | 1.9e-07 | 7.4e-08 | 1.2e-07 | 3 | ACYP2 |
28 | 2 | 68850921 | 70593838 | 3 | 1 | 4.4e-10 | 1.2e-09 | 1.9e-01 | 95 | GFPT1 |
29 | 2 | 99468341 | 101731705 | 3 | 1 | 4.4e-10 | 1.5e-10 | 3.0e-03 | 78 | LONRF2 |
30 | 2 | 106725928 | 108199394 | 1 | 1 | 4.3e-08 | 2.0e-06 | 3.3e-01 | 96 | ST6GAL2 |
31 | 2 | 111957073 | 113641631 | 2 | 1 | 1.7e-08 | 8.6e-07 | 9.6e-04 | 55 | MERTK |
32 | 2 | 134794256 | 137323986 | 7 | 1 | 1.2e-09 | 7.8e-10 | 2.1e-01 | 96 | AC016725.4 |
33 | 2 | 164657815 | 166396485 | 2 | 3 | 9.4e-20 | 1.3e-24 | 3.8e-02 | 96 | COBLL1 GRB14 |
34 | 2 | 174238261 | 175812508 | 1 | 1 | 9.8e-08 | 4.2e-07 | 5.9e-01 | 99 | OLA1 |
35 | 2 | 197134790 | 199079806 | 3 | 1 | 2.8e-10 | 6.5e-10 | 1.4e-02 | 84 | SF3B1 |
36 | 2 | 225574650 | 227217161 | 1 | 1 | 3.4e-08 | 1.9e-15 | 9.9e-10 | 41 | NYAP2 |
37 | 2 | 229929352 | 231485512 | 1 | 1 | 8.5e-09 | 4.9e-16 | 3.7e-09 | 47 | TRIP12 |
38 | 3 | 11631498 | 13169322 | 1 | 2 | 1.0e-16 | 1.3e-25 | 4.0e-12 | 56 | PPARG |
39 | 3 | 14947539 | 17051328 | 3 | 2 | 3.2e-08 | 5.4e-08 | 4.8e-01 | 98 | BTD RP11-415F23.2 |
40 | 3 | 35439546 | 36079910 | 1 | 1 | 8.6e-08 | 4.2e-11 | 3.7e-06 | 51 | ARPP21 |
41 | 3 | 36589887 | 38087123 | 1 | 1 | 2.3e-08 | 2.0e-06 | 9.4e-01 | 100 | GOLGA4 |
42 | 3 | 43899743 | 45322791 | 1 | 1 | 3.8e-08 | 7.2e-10 | 9.4e-08 | 25 | ZKSCAN7 |
43 | 3 | 48029118 | 51043528 | 26 | 2 | 8.3e-26 | 7.2e-22 | 8.8e-01 | 100 | MST1R RNF123 |
44 | 3 | 63973002 | 65692374 | 1 | 1 | 1.2e-07 | 7.4e-10 | 8.3e-05 | 59 | ADAMTS9-AS2 |
45 | 3 | 70757099 | 71880670 | 1 | 1 | 3.7e-09 | 7.2e-09 | 1.0e+00 | 100 | FOXP1 |
46 | 4 | 69713 | 1610872 | 6 | 7 | 1.3e-12 | 2.7e-09 | NaN | NaN | DGKQ PCGF3 SLC26A1 |
47 | 4 | 2152449 | 3943984 | 6 | 2 | 4.6e-09 | 9.0e-09 | 1.6e-01 | 94 | HTT NOP14 |
48 | 4 | 52683607 | 53598975 | 1 | 1 | 1.4e-08 | 3.6e-07 | 7.7e-01 | 100 | SGCB |
49 | 4 | 55517005 | 57110821 | 4 | 1 | 2.4e-10 | 5.7e-12 | 1.6e-03 | 79 | TMEM165 |
50 | 4 | 67642191 | 69098006 | 1 | 1 | 5.9e-08 | 1.7e-09 | 6.5e-07 | 32 | CENPC |
51 | 4 | 77938810 | 79439935 | 1 | 1 | 1.2e-09 | 1.2e-08 | 8.4e-01 | 100 | CNOT6L |
52 | 4 | 80512228 | 81031736 | 1 | 1 | 1.9e-11 | 2.2e-11 | 5.1e-04 | 73 | GDEP |
53 | 5 | 42878849 | 44296986 | 1 | 2 | 2.1e-08 | 3.4e-07 | 2.2e-04 | 47 | NNT-AS1 |
54 | 5 | 73626450 | 75704085 | 9 | 2 | 1.4e-18 | 1.1e-18 | 1.2e-01 | 97 | GCNT4 POC5 |
55 | 5 | 77052232 | 77837260 | 1 | 1 | 1.5e-08 | 1.5e-07 | 2.4e-01 | 95 | AP3B1 |
56 | 5 | 86867897 | 88677293 | 2 | 1 | 6.4e-17 | 6.5e-18 | 2.7e-02 | 93 | LINC00461 |
57 | 5 | 95168155 | 96812542 | 1 | 1 | 1.4e-08 | 3.2e-08 | 2.4e-06 | 27 | CAST |
58 | 5 | 126587995 | 128116643 | 2 | 1 | 2.3e-12 | 5.4e-09 | 6.9e-01 | 100 | FLJ33630 |
59 | 5 | 147131749 | 148712150 | 1 | 1 | 2.5e-07 | 1.0e-05 | 5.8e-01 | 98 | HTR4 |
60 | 5 | 169590807 | 171533656 | 2 | 1 | 3.3e-11 | 3.9e-12 | 2.0e-02 | 89 | RANBP17 |
61 | 5 | 178279114 | 179732678 | 1 | 1 | 3.0e-08 | 2.6e-07 | 1.3e-06 | 11 | RUFY1 |
62 | 6 | 17060849 | 18686970 | 1 | 1 | 9.3e-08 | 4.6e-05 | 6.4e-01 | 99 | KIF13A |
63 | 6 | 25035920 | 26689223 | 3 | 2 | 4.8e-18 | 7.1e-31 | 2.0e-19 | 39 | LRRC16A U91328.19 |
64 | 6 | 33745071 | 36804187 | 10 | 3 | 2.1e-30 | 9.4e-24 | 7.7e-02 | 97 | MAPK13 PPARD UHRF1BP1 |
65 | 6 | 125970401 | 127355237 | 1 | 1 | 1.3e-11 | 7.7e-12 | 4.2e-02 | 91 | CENPW |
66 | 7 | 2032803 | 3581391 | 2 | 1 | 2.8e-10 | 7.2e-10 | 2.8e-10 | -5 | AMZ1 |
67 | 7 | 5925156 | 7492402 | 4 | 2 | 7.7e-09 | 2.0e-08 | 3.2e-01 | 97 | PMS2CL ZDHHC4 |
68 | 7 | 23913624 | 25432157 | 1 | 1 | 2.5e-07 | 7.0e-08 | 1.0e-02 | 77 | MPP6 |
69 | 7 | 26437578 | 27909037 | 3 | 2 | 6.8e-09 | 6.2e-12 | 1.9e-02 | 88 | HOXA10 HOXA9 |
70 | 7 | 44090853 | 45498400 | 2 | 1 | 2.9e-09 | 4.8e-11 | 3.0e-03 | 80 | PPIA |
71 | 7 | 73425238 | 75842792 | 9 | 3 | 1.3e-14 | 2.6e-13 | 1.0e+00 | 100 | NCF1 PMS2L3 STAG3L1 |
72 | 7 | 76609573 | 78122616 | 4 | 1 | 1.1e-11 | 1.6e-08 | 5.1e-01 | 99 | RSBN1L |
73 | 7 | 98341025 | 99827148 | 3 | 1 | 1.6e-08 | 8.8e-09 | 1.0e+00 | 100 | ZKSCAN5 |
74 | 7 | 129917130 | 131315092 | 1 | 1 | 1.9e-08 | 2.8e-14 | 1.9e-07 | 53 | RP11-138A9.1 |
75 | 8 | 21249296 | 24094711 | 5 | 2 | 3.0e-09 | 2.4e-09 | 4.7e-01 | 98 | AC091171.1 SLC25A37 |
76 | 8 | 29996824 | 31433801 | 1 | 1 | 2.3e-11 | 5.2e-11 | 8.8e-03 | 84 | TEX15 |
77 | 8 | 86841229 | 88211679 | 3 | 1 | 1.7e-08 | 6.7e-08 | 2.8e-01 | 96 | FAM82B |
78 | 8 | 116176124 | 116927700 | 1 | 2 | 1.8e-13 | 6.8e-17 | 1.0e-04 | 78 | TRPS1 |
79 | 9 | 14857740 | 16758776 | 2 | 2 | 6.1e-33 | 7.8e-28 | 6.2e-01 | 100 | C9orf93 CCDC171 |
80 | 9 | 95640381 | 97136378 | 1 | 1 | 5.3e-08 | 1.0e-07 | 9.8e-02 | 90 | PHF2 |
81 | 9 | 102613672 | 103312290 | 1 | 1 | 1.2e-07 | 5.5e-08 | 1.0e+00 | 100 | INVS |
82 | 9 | 130380101 | 131772389 | 1 | 1 | 1.1e-07 | 5.1e-05 | 2.6e-01 | 92 | RP11-339B21.13 |
83 | 9 | 136197834 | 137631198 | 1 | 1 | 2.4e-07 | 1.9e-06 | 2.9e-01 | 95 | BRD3 |
84 | 10 | 20372032 | 22724472 | 3 | 2 | 1.1e-17 | 1.0e-19 | 1.2e-02 | 92 | MLLT10 NEBL |
85 | 10 | 71736472 | 73345380 | 2 | 2 | 4.5e-10 | 2.1e-15 | 9.7e-01 | 100 | ADAMTS14 PCBD1 |
86 | 10 | 87114668 | 88375496 | 1 | 1 | 6.8e-09 | 1.5e-09 | 8.4e-05 | 58 | GRID1 |
87 | 10 | 93119767 | 94744904 | 1 | 1 | 1.8e-08 | 1.0e-06 | 4.2e-02 | 83 | CPEB3 |
88 | 10 | 98916782 | 100488720 | 2 | 2 | 3.2e-10 | 1.8e-14 | 8.1e-05 | 74 | CRTAC1 GOLGA7B |
89 | 10 | 117894117 | 119582073 | 3 | 1 | 1.7e-09 | 1.8e-10 | 1.0e+00 | 100 | KIAA1598 |
90 | 10 | 119742699 | 121212405 | 1 | 1 | 1.4e-07 | 9.5e-08 | 1.0e+00 | 100 | CACUL1 |
91 | 10 | 125739009 | 127174440 | 1 | 1 | 4.6e-09 | 5.0e-09 | 1.0e+00 | 100 | METTL10 |
92 | 10 | 130566749 | 132263732 | 1 | 1 | 3.0e-07 | 6.7e-06 | 6.0e-05 | 21 | MGMT |
93 | 10 | 133309117 | 135192153 | 3 | 3 | 2.5e-10 | 3.7e-11 | 1.0e+00 | 100 | DPYSL4 GPR123 STK32C |
94 | 11 | 7714238 | 11027552 | 3 | 2 | 7.7e-09 | 6.4e-11 | 3.9e-03 | 80 | ADM STK33 |
95 | 11 | 26818083 | 29054545 | 3 | 2 | 3.5e-19 | 2.2e-24 | 8.6e-08 | 72 | BDNF-AS LIN7C |
96 | 11 | 42881882 | 44607471 | 3 | 1 | 8.5e-16 | 8.7e-18 | 1.0e+00 | 100 | RP11-613D13.5 |
97 | 11 | 46180005 | 48783497 | 21 | 2 | 3.4e-35 | 2.3e-35 | 1.0e+00 | 100 | C1QTNF4 NUP160 |
98 | 11 | 63295034 | 64761779 | 7 | 1 | 5.7e-09 | 3.1e-08 | 8.3e-02 | 90 | VEGFB |
99 | 11 | 64954053 | 68077666 | 12 | 3 | 8.9e-11 | 1.1e-13 | 3.5e-01 | 98 | CTD-3074O7.5 FIBP PTPRCAP |
100 | 11 | 116805204 | 117308936 | 1 | 1 | 1.5e-07 | 3.1e-07 | 3.9e-01 | 97 | SIDT2 |
101 | 11 | 118205702 | 119659753 | 4 | 1 | 3.8e-11 | 1.0e-09 | 6.6e-01 | 100 | HMBS |
102 | 11 | 121830239 | 123382247 | 1 | 1 | 2.1e-10 | 7.0e-09 | 4.6e-07 | 24 | UBASH3B |
103 | 11 | 130038487 | 131476599 | 2 | 1 | 2.8e-12 | 9.5e-11 | 1.7e-02 | 86 | SNX19 |
104 | 12 | 49569311 | 51256065 | 2 | 2 | 4.4e-11 | 7.6e-22 | 1.0e-08 | 64 | CERS5 FAIM2 |
105 | 12 | 54158993 | 54653258 | 1 | 1 | 1.4e-07 | 3.5e-10 | 6.4e-04 | 70 | HOXC8 |
106 | 12 | 89116708 | 90682621 | 2 | 1 | 3.5e-15 | 4.1e-15 | 4.9e-07 | 59 | POC1B |
107 | 12 | 107433672 | 108852590 | 2 | 1 | 3.6e-13 | 1.4e-16 | 2.4e-15 | 8 | PRDM4 |
108 | 12 | 109866528 | 111353556 | 1 | 1 | 8.2e-08 | 2.1e-07 | 1.0e+00 | 100 | IFT81 |
109 | 12 | 120044549 | 125270773 | 24 | 11 | 5.5e-32 | 1.4e-21 | NaN | NaN | BCL7A CCDC92 HIP1R KDM2B MLXIP P2RX4 RP11-380L11.3 RP11-380L11.4 SIRT4 SNRNP35 |
110 | 13 | 19552050 | 21133479 | 3 | 1 | 2.2e-10 | 1.0e-09 | 1.0e+00 | 100 | PSPC1 |
111 | 13 | 30336006 | 31886850 | 1 | 1 | 1.5e-08 | 3.1e-10 | 6.1e-03 | 81 | HMGB1 |
112 | 13 | 32305370 | 34332027 | 2 | 1 | 1.4e-08 | 9.0e-09 | 1.0e+00 | 100 | RP11-298P3.4 |
113 | 13 | 86121175 | 86620040 | 1 | 1 | 7.7e-09 | 6.5e-09 | 1.0e+00 | 100 | SLITRK6 |
114 | 13 | 98109395 | 99925872 | 3 | 1 | 2.2e-12 | 4.8e-13 | 1.0e+00 | 100 | FARP1-AS1 |
115 | 13 | 111270363 | 112552523 | 2 | 1 | 2.2e-08 | 5.6e-13 | 8.5e-13 | 2 | TEX29 |
116 | 14 | 55888533 | 57466561 | 1 | 1 | 1.5e-07 | 9.2e-07 | 9.1e-01 | 100 | PELI2 |
117 | 14 | 69412804 | 69954376 | 1 | 1 | 1.2e-07 | 8.5e-10 | 2.0e-04 | 63 | EXD2 |
118 | 14 | 74424938 | 76064624 | 2 | 1 | 3.1e-08 | 4.3e-08 | 1.3e-01 | 92 | AREL1 |
119 | 14 | 92286262 | 94495324 | 3 | 3 | 2.0e-09 | 1.1e-12 | 1.2e-02 | 88 | BTBD7 C14orf142 RIN3 |
120 | 14 | 101720669 | 104300151 | 4 | 3 | 2.6e-09 | 8.4e-12 | 5.3e-05 | 65 | CKB RP11-1017G21.6 TRAF3 |
121 | 15 | 40828922 | 42468786 | 7 | 1 | 6.4e-09 | 6.0e-09 | 1.0e+00 | 100 | RTF1 |
122 | 15 | 51040798 | 52612484 | 1 | 1 | 2.2e-07 | 3.0e-08 | 3.7e-02 | 86 | DMXL2 |
123 | 15 | 65989359 | 68789191 | 8 | 9 | 4.5e-21 | 9.5e-19 | NaN | NaN | IQCH MAP2K1 MAP2K5 SMAD3 |
124 | 15 | 72184968 | 74291976 | 4 | 2 | 3.6e-10 | 4.3e-14 | 1.7e-03 | 83 | BBS4 NEO1 |
125 | 15 | 80272818 | 81737095 | 1 | 1 | 1.5e-09 | 5.6e-09 | 7.1e-06 | 41 | ABHD17C |
126 | 15 | 83632164 | 86489699 | 14 | 7 | 4.7e-14 | 5.1e-23 | NaN | NaN | AC103965.1 CSPG4P11 LOC388152 RP11-182J1.14 UBE2Q2P1 |
127 | 15 | 99816860 | 101559136 | 1 | 1 | 1.4e-07 | 1.4e-06 | 2.4e-03 | 60 | ADAMTS17 |
128 | 16 | 86671 | 1100776 | 4 | 1 | 1.6e-10 | 3.0e-10 | 1.9e-02 | 86 | AXIN1 |
129 | 16 | 1994980 | 2488693 | 1 | 1 | 1.9e-07 | 6.2e-08 | 4.4e-06 | 28 | CASKIN1 |
130 | 16 | 3301360 | 5627737 | 2 | 2 | 6.2e-14 | 6.8e-18 | 2.5e-06 | 70 | RP11-462G12.1 UBN1 |
131 | 16 | 24162204 | 25620010 | 1 | 1 | 2.3e-12 | 1.2e-12 | 2.5e-02 | 90 | SLC5A11 |
132 | 16 | 27655848 | 31957368 | 76 | 7 | 2.6e-38 | 5.1e-35 | NaN | NaN | EIF3C KAT8 MAPK3 RP11-231C14.4 RP11-347C12.1 SULT1A2 |
133 | 16 | 52828325 | 54846383 | 2 | 3 | 5.6e-23 | 1.0e-95 | 5.1e-51 | 48 | AKTIP FTO |
134 | 16 | 68764512 | 70978362 | 14 | 2 | 7.1e-20 | 2.1e-18 | 1.6e-01 | 98 | NQO1 RP11-296I10.3 |
135 | 16 | 73788021 | 75396376 | 2 | 1 | 8.5e-08 | 9.3e-07 | 1.4e-01 | 91 | RFWD3 |
136 | 16 | 80779331 | 82439714 | 1 | 1 | 2.7e-07 | 9.2e-07 | 1.0e+00 | 100 | CMIP |
137 | 16 | 88934149 | 90172696 | 4 | 1 | 9.1e-09 | 2.8e-07 | 3.3e-02 | 83 | SNORD68 |
138 | 17 | 1517914 | 2918626 | 1 | 1 | 6.9e-11 | 1.4e-19 | 1.8e-12 | 39 | SRR |
139 | 17 | 3208350 | 5714962 | 4 | 2 | 1.1e-08 | 1.0e-07 | 1.1e-01 | 91 | AC012146.7 RP11-810M2.2 |
140 | 17 | 6754828 | 8161149 | 3 | 2 | 1.8e-08 | 8.4e-08 | 3.2e-02 | 84 | C17orf81 CHRNB1 |
141 | 17 | 20608648 | 22010013 | 1 | 1 | 6.9e-08 | 5.7e-10 | 3.8e-05 | 56 | KCNJ12 |
142 | 17 | 27222988 | 29126951 | 5 | 1 | 7.2e-10 | 2.5e-10 | 3.7e-02 | 89 | CCDC55 |
143 | 17 | 34146026 | 35675511 | 6 | 1 | 2.2e-12 | 1.5e-11 | 3.6e-01 | 98 | ZNHIT3 |
144 | 17 | 40009690 | 47718188 | 29 | 7 | 3.1e-16 | 3.9e-16 | 2.6e-01 | 98 | ARL17A C17orf65 CDK5RAP3 NMT1 RP11-6N17.9 SNF8 TUBG2 |
145 | 17 | 60930216 | 62694738 | 4 | 3 | 1.3e-10 | 4.0e-08 | 8.5e-01 | 100 | DCAF7 PSMC5 STRADA |
146 | 17 | 65123352 | 66885526 | 8 | 1 | 1.1e-22 | 3.8e-23 | 1.0e+00 | 100 | C17orf58 |
147 | 17 | 73175294 | 74588633 | 3 | 1 | 4.0e-08 | 1.8e-07 | 1.0e+00 | 100 | RP11-552F3.10 |
148 | 17 | 77821891 | 79637565 | 2 | 1 | 2.0e-10 | 2.0e-09 | 8.0e-03 | 80 | RPTOR |
149 | 18 | 12090696 | 13822256 | 2 | 1 | 1.7e-08 | 6.2e-09 | 2.3e-04 | 60 | PTPN2 |
150 | 18 | 20082830 | 21863589 | 5 | 1 | 5.4e-17 | 8.8e-16 | 5.9e-02 | 94 | NPC1 |
151 | 18 | 38837001 | 40365619 | 1 | 1 | 1.4e-07 | 7.1e-08 | 2.7e-04 | 54 | PIK3C3 |
152 | 18 | 57349900 | 58729694 | 1 | 1 | 3.6e-08 | 5.2e-29 | 4.3e-30 | -4 | MC4R |
153 | 19 | 3309021 | 4821612 | 2 | 2 | 3.5e-11 | 9.3e-14 | 1.2e-02 | 89 | MAP2K2 PIAS4 |
154 | 19 | 17473015 | 19987491 | 14 | 9 | 1.3e-19 | 1.2e-20 | 1.0e+00 | 100 | AC007192.6 CRTC1 IL12RB1 JUND KIAA1683 MAST3 MEF2BNB PDE4C SSBP4 |
155 | 19 | 29606361 | 31013761 | 1 | 1 | 1.3e-12 | 2.0e-13 | 2.9e-02 | 91 | CCNE1 |
156 | 19 | 32209988 | 34959979 | 3 | 2 | 2.3e-21 | 3.6e-19 | 1.4e-01 | 97 | DPY19L3 PEPD |
157 | 20 | 24230055 | 26307797 | 9 | 8 | 7.5e-15 | 7.6e-13 | 1.0e+00 | 100 | ABHD12 APMAP ENTPD6 NINL PYGB |
158 | 20 | 31981432 | 33397303 | 1 | 1 | 2.8e-07 | 9.0e-08 | 1.0e-04 | 47 | EIF2S2 |
159 | 20 | 39114404 | 40516054 | 2 | 1 | 1.5e-08 | 1.9e-09 | 2.1e-02 | 85 | ZHX3 |
160 | 20 | 43291070 | 43830368 | 1 | 1 | 1.6e-07 | 1.7e-06 | 2.6e-01 | 94 | PABPC1L |
161 | 20 | 46838455 | 48603940 | 2 | 1 | 1.4e-08 | 1.8e-09 | 5.2e-05 | 55 | ARFGEF2 |
162 | 20 | 49975801 | 51518982 | 1 | 1 | 1.7e-07 | 1.0e-09 | 9.6e-04 | 71 | ZFP64 |
163 | 20 | 61636050 | 62912463 | 6 | 1 | 3.0e-12 | 1.2e-11 | 1.0e+00 | 100 | LIME1 |
164 | 21 | 45583922 | 47343320 | 3 | 2 | 1.1e-08 | 6.2e-12 | 5.0e-03 | 83 | ADARB1 C21orf122 |
165 | 22 | 17421989 | 18655860 | 2 | 1 | 5.1e-08 | 8.4e-08 | 2.1e-01 | 94 | BCL2L13 |
166 | 22 | 37528576 | 39663066 | 8 | 6 | 2.9e-18 | 9.7e-18 | NaN | NaN | ANKRD54 PLA2G6 TMEM184B |
167 | 22 | 41181586 | 43232818 | 5 | 1 | 1.4e-08 | 7.5e-08 | 6.1e-01 | 99 | POLR3H |
Trait | chisq ratio | # genes+ | # genes++ | % genes++ | corr | corr P | genes |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|---|---|---|---|
GTEx | Ovary | 25 | 2.8 | 4.9 |
GTEx | Brain Cortex | 28 | 2.7 | 4.8 |
GTEx | Prostate | 22 | 2.6 | 4.7 |
GTEx | Vagina | 15 | 2.4 | 4.7 |
GTEx | Brain Cerebellar Hemisphere | 43 | 2.9 | 4.5 |
GTEx | Stomach | 36 | 2.5 | 4.5 |
GTEx | Whole Blood | 49 | 2.5 | 4.5 |
GTEx | Adipose Subcutaneous | 79 | 2.3 | 4.4 |
GTEx | Artery Aorta | 63 | 2.1 | 4.4 |
GTEx | Artery Tibial | 79 | 2.1 | 4.4 |
GTEx | Brain Putamen basal ganglia | 14 | 2.2 | 4.4 |
GTEx | Heart Atrial Appendage | 42 | 2.7 | 4.4 |
GTEx | Heart Left Ventricle | 37 | 2.4 | 4.4 |
GTEx | Skin Not Sun Exposed Suprapubic | 54 | 2.2 | 4.4 |
GTEx | Small Intestine Terminal Ileum | 10 | 2.2 | 4.4 |
GTEx | Adipose Visceral Omentum | 46 | 2.3 | 4.3 |
GTEx | Brain Caudate basal ganglia | 23 | 2.5 | 4.3 |
GTEx | Brain Cerebellum | 41 | 2.1 | 4.3 |
GTEx | Breast Mammary Tissue | 41 | 2.1 | 4.3 |
GTEx | Esophagus Gastroesophageal Junction | 33 | 2.3 | 4.3 |
GTEx | Esophagus Mucosa | 75 | 2.3 | 4.3 |
GTEx | Esophagus Muscularis | 73 | 2.3 | 4.3 |
GTEx | Liver | 19 | 2.6 | 4.3 |
GTEx | Lung | 67 | 2.3 | 4.3 |
GTEx | Pituitary | 29 | 2.6 | 4.3 |
GTEx | Skin Sun Exposed Lower leg | 71 | 2.0 | 4.3 |
GTEx | Spleen | 26 | 1.8 | 4.3 |
GTEx | Uterus | 13 | 2.3 | 4.3 |
GTEx | Brain Frontal Cortex BA9 | 19 | 2.1 | 4.2 |
GTEx | Brain Nucleus accumbens basal ganglia | 26 | 3.0 | 4.2 |
GTEx | Breast Mammary Tissue (Male) | 25 | 2.1 | 4.2 |
GTEx | Cells EBV-transformed lymphocytes | 26 | 1.8 | 4.2 |
GTEx | Cells Transformed fibroblasts | 88 | 2.1 | 4.2 |
GTEx | Colon Transverse | 44 | 2.1 | 4.2 |
GTEx | Nerve Tibial | 102 | 2.4 | 4.2 |
ROSMAP | Brain Pre-frontal Cortex | 107 | 2.4 | 4.2 |
GTEx | Brain Hypothalamus | 10 | 1.7 | 4.1 |
GTEx | Muscle Skeletal | 64 | 2.2 | 4.1 |
GTEx | Adrenal Gland | 25 | 1.7 | 4.0 |
GTEx | Artery Coronary | 20 | 1.7 | 4.0 |
GTEx | Breast Mammary Tissue (Female) | 25 | 1.5 | 4.0 |
GTEx | Colon Sigmoid | 30 | 2.1 | 4.0 |
GTEx | Pancreas | 32 | 2.0 | 4.0 |
GTEx | Thyroid | 84 | 2.1 | 4.0 |
The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | 20 | 1.8 | 4.0 |
GTEx | Testis | 54 | 1.7 | 3.9 |
The Cancer Genome Atlas | Colon Adenocarcinoma | 40 | 1.9 | 3.9 |
The Cancer Genome Atlas | Esophageal Carcinoma | 17 | 2.5 | 3.9 |
The Cancer Genome Atlas | Glioblastoma Multiforme | 19 | 1.9 | 3.9 |
The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | 11 | 2.2 | 3.9 |
The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | 17 | 1.5 | 3.8 |
The Cancer Genome Atlas | Brain Lower Grade Glioma | 74 | 1.7 | 3.8 |
METSIM | Adipose | 79 | 1.7 | 3.7 |
CommonMind | Brain Pre-frontal Cortex | 98 | 1.8 | 3.7 |
The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | 42 | 1.5 | 3.7 |
The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | 25 | 1.6 | 3.7 |
The Cancer Genome Atlas | Soft Tissue Sarcoma | 21 | 2.0 | 3.7 |
The Cancer Genome Atlas | Stomach Adenocarcinoma | 21 | 1.2 | 3.7 |
The Cancer Genome Atlas | Bladder Urothelial Carcinoma | 25 | 1.5 | 3.6 |
The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | 65 | 1.6 | 3.6 |
The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | 27 | 1.3 | 3.6 |
The Cancer Genome Atlas | Lung Adenocarcinoma | 46 | 1.6 | 3.6 |
The Cancer Genome Atlas | Pancreatic Adenocarcinoma | 23 | 1.4 | 3.6 |
The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | 21 | 1.6 | 3.6 |
The Cancer Genome Atlas | Skin Cutaneous Melanoma | 8 | 1.5 | 3.6 |
NTR | Blood | 33 | 1.4 | 3.5 |
The Cancer Genome Atlas | Breast Invasive Carcinoma | 59 | 1.3 | 3.5 |
The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | 39 | 1.6 | 3.5 |
The Cancer Genome Atlas | Prostate Adenocarcinoma | 66 | 1.4 | 3.5 |
The Cancer Genome Atlas | Thyroid Carcinoma | 61 | 1.2 | 3.5 |
YFS | Blood | 65 | 1.4 | 3.4 |
The Cancer Genome Atlas | Testicular Germ Cell Tumors | 22 | 1.7 | 3.4 |
GTEx | Brain Hippocampus | 7 | 1.3 | 3.3 |
The Cancer Genome Atlas | Rectum Adenocarcinoma | 9 | 1.3 | 3.0 |