[Hub]/) : Traits : Body fat percentage : ← →

chr4:69,713-1,610,872

Best TWAS P=1.32e-12 · Best GWAS P=2.65e-09 conditioned to NaN

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	SLC26A1	0.12	0.06	bslmm	400	0.08	8.0e-10	5.2	6.2	4.6e-10	0.51	0.08	0.92	TRUE
2	GTEx	Adipose Subcutaneous	SLC26A1	0.37	0.32	lasso	4	0.32	5.7e-27	5.3	5.4	6.9e-08	0.55	0.06	0.94	FALSE
3	GTEx	Adipose Subcutaneous	CPLX1	0.20	0.11	lasso	6	0.11	2.5e-09	-5.2	5.2	2.1e-07	0.08	0.08	0.92	FALSE
4	GTEx	Adipose Subcutaneous	RP11-440L14.1	0.58	0.38	enet	36	0.48	1.9e-43	-2.8	5.2	1.9e-07	0.16	0.99	0.00	FALSE
5	GTEx	Adipose Visceral Omentum	SLC26A1	0.47	0.36	lasso	7	0.36	1.8e-19	5.3	5.4	6.8e-08	0.59	0.06	0.94	FALSE
6	GTEx	Artery Aorta	SLC26A1	0.42	0.37	lasso	6	0.38	6.4e-22	5.2	5.4	5.4e-08	0.54	0.06	0.94	FALSE
7	GTEx	Artery Tibial	SLC26A1	0.33	0.35	lasso	3	0.36	3.2e-29	5.3	5.2	1.8e-07	0.56	0.06	0.94	FALSE
8	GTEx	Artery Tibial	GAK	0.19	0.03	enet	29	0.10	2.4e-08	-3.0	6.0	2.1e-09	0.59	0.01	0.99	FALSE
9	GTEx	Brain Caudate basal ganglia	SLC26A1	0.27	0.13	lasso	2	0.18	6.8e-06	5.3	5.1	2.8e-07	0.50	0.06	0.85	FALSE
10	GTEx	Brain Cerebellar Hemisphere	SLC26A1	0.33	0.14	lasso	8	0.15	1.0e-04	5.3	5.5	3.1e-08	0.55	0.09	0.67	FALSE
11	GTEx	Brain Cerebellum	SLC26A1	0.61	0.41	enet	22	0.46	2.1e-15	5.2	6.2	5.2e-10	0.57	0.07	0.93	FALSE
12	GTEx	Brain Cortex	SLC26A1	0.45	0.35	lasso	3	0.33	6.9e-10	5.2	5.5	3.6e-08	0.54	0.06	0.93	FALSE
13	GTEx	Brain Frontal Cortex BA9	SLC26A1	0.30	0.24	lasso	3	0.15	8.0e-05	5.3	5.3	1.4e-07	0.56	0.06	0.82	FALSE
14	GTEx	Breast Mammary Tissue	SLC26A1	0.34	0.31	lasso	4	0.29	2.7e-15	5.3	5.3	8.9e-08	0.62	0.06	0.94	FALSE
15	GTEx	Breast Mammary Tissue (Male)	SLC26A1	0.17	0.24	lasso	1	0.19	4.4e-05	5.3	5.3	1.4e-07	0.56	0.05	0.54	FALSE
16	GTEx	Cells Transformed fibroblasts	SLC26A1	0.36	0.22	enet	24	0.26	1.4e-19	5.3	5.3	8.7e-08	0.62	0.09	0.91	FALSE
17	GTEx	Colon Sigmoid	SLC26A1	0.45	0.48	lasso	3	0.48	6.7e-19	5.3	5.4	8.4e-08	0.56	0.06	0.94	FALSE
18	GTEx	Colon Transverse	SLC26A1	0.26	0.23	lasso	4	0.22	9.7e-11	5.2	5.2	1.9e-07	0.58	0.08	0.92	FALSE
19	GTEx	Esophagus Gastroesophageal Junction	SLC26A1	0.44	0.33	lasso	6	0.35	1.8e-13	5.3	5.2	2.5e-07	0.44	0.07	0.93	FALSE
20	GTEx	Esophagus Mucosa	SLC26A1	0.45	0.39	enet	15	0.40	2.5e-28	5.2	5.2	2.2e-07	0.52	0.07	0.93	FALSE
21	GTEx	Esophagus Muscularis	SLC26A1	0.38	0.37	lasso	4	0.36	4.3e-23	5.3	5.5	4.9e-08	0.57	0.06	0.94	FALSE
22	GTEx	Heart Atrial Appendage	SLC26A1	0.44	0.39	lasso	6	0.37	8.0e-18	4.9	5.3	8.8e-08	0.60	0.14	0.86	FALSE
23	GTEx	Heart Left Ventricle	SLC26A1	0.22	0.13	enet	10	0.17	1.4e-09	5.2	5.3	1.2e-07	0.49	0.07	0.93	FALSE
24	GTEx	Lung	SLC26A1	0.51	0.41	lasso	9	0.42	1.2e-34	5.3	5.4	5.9e-08	0.56	0.06	0.94	FALSE
25	GTEx	Muscle Skeletal	DGKQ	0.15	0.07	enet	15	0.09	6.6e-09	5.3	5.4	6.7e-08	0.57	0.06	0.94	TRUE
26	GTEx	Muscle Skeletal	SLC26A1	0.16	0.12	lasso	6	0.12	1.7e-11	5.3	5.3	1.1e-07	0.63	0.07	0.93	FALSE
27	GTEx	Nerve Tibial	SLC26A1	0.55	0.49	lasso	4	0.50	1.0e-40	5.2	5.3	9.7e-08	0.56	0.07	0.93	FALSE
28	GTEx	Nerve Tibial	CPLX1	0.26	0.05	lasso	5	0.09	1.1e-06	-5.3	5.4	5.6e-08	0.16	0.09	0.91	FALSE
29	GTEx	Pituitary	SLC26A1	0.37	0.38	enet	14	0.33	3.9e-09	5.3	5.8	8.2e-09	0.65	0.06	0.93	TRUE
30	GTEx	Skin Not Sun Exposed Suprapubic	SLC26A1	0.55	0.38	lasso	8	0.40	2.7e-23	5.2	5.2	1.5e-07	0.52	0.06	0.93	FALSE
31	GTEx	Skin Sun Exposed Lower leg	SLC26A1	0.48	0.38	lasso	5	0.41	6.2e-36	5.2	5.2	2.3e-07	0.57	0.08	0.92	FALSE
32	GTEx	Spleen	SLC26A1	0.35	0.19	lasso	4	0.25	4.7e-07	5.3	5.5	2.8e-08	0.56	0.08	0.86	FALSE
33	GTEx	Stomach	SLC26A1	0.26	0.17	enet	14	0.16	4.0e-08	5.2	6.5	7.8e-11	0.63	0.06	0.94	TRUE
34	GTEx	Thyroid	SLC26A1	0.53	0.46	lasso	8	0.46	1.3e-38	5.2	5.3	1.4e-07	0.58	0.06	0.93	FALSE
35	GTEx	Vagina	SLC26A1	0.26	0.41	lasso	1	0.37	2.4e-09	5.3	5.3	1.4e-07	0.56	0.07	0.91	FALSE
36	GTEx	Whole Blood	SLC26A1	0.07	0.05	enet	13	0.07	3.0e-07	-4.4	5.3	9.3e-08	0.53	0.23	0.76	TRUE
37	METSIM	Adipose	SLC26A1	0.16	0.13	enet	10	0.13	2.1e-18	5.2	5.5	4.4e-08	0.48	0.06	0.94	FALSE
38	NTR	Blood	PCGF3	0.07	0.00	enet	33	0.02	7.7e-08	4.2	5.5	3.4e-08	0.27	0.36	0.58	TRUE
39	ROSMAP	Brain Pre-frontal Cortex	DGKQ	0.37	0.36	lasso	6	0.38	1.9e-51	5.2	5.3	9.1e-08	0.57	0.07	0.93	FALSE
40	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	SLC26A1	0.05	0.01	blup	53	0.02	1.2e-02	4.1	5.5	5.1e-08	0.58	0.06	0.47	FALSE
41	The Cancer Genome Atlas	Breast Invasive Carcinoma	PCGF3	0.03	0.00	blup	69	0.01	3.7e-03	4.2	7.1	1.3e-12	0.34	0.02	0.40	TRUE
42	The Cancer Genome Atlas	Brain Lower Grade Glioma	PCGF3	0.08	0.02	lasso	4	0.07	1.9e-08	-4.1	5.2	2.3e-07	0.14	0.03	0.86	FALSE
43	The Cancer Genome Atlas	Testicular Germ Cell Tumors	PCGF3	0.13	0.00	blup	69	0.04	1.4e-02	-5.3	5.6	1.8e-08	0.10	0.01	0.76	FALSE