Best TWAS P=5.52e-16 · Best GWAS P=1.69e-29 conditioned to 5.35e-08
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Testis | FAIM2 | 0.27 | 0.09 | lasso | 5 | 0.06 | 0.00093 | 8.937 | -8.1 | 5.5e-16 | -0.77 | 0.04 | 0.85 | TRUE |
| 2 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FAIM2 | 0.02 | 0.00 | blup | 71 | 0.01 | 0.00853 | 0.017 | -6.0 | 1.4e-09 | -0.36 | 0.16 | 0.13 | TRUE |