Best TWAS P=3.3e-08 · Best GWAS P=5.22e-07 conditioned to 0.0464
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Lung | RP11-552F3.10 | 0.12 | 0.02 | lasso | 2 | 0.03 | 4.4e-03 | 5.0 | -5.2 | 1.9e-07 | -0.96 | 0.01 | 0.43 | FALSE |
| 2 | YFS | Blood | GALK1 | 0.05 | 0.04 | enet | 26 | 0.04 | 2.4e-13 | 4.7 | -5.5 | 3.3e-08 | -0.63 | 0.02 | 0.97 | TRUE |