Best TWAS P=1.11e-07 · Best GWAS P=1.21e-09 conditioned to 0.00206
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | PSPH | 0.19 | 0.09 | lasso | 8 | 0.12 | 2.5e-14 | -5.6 | -5.3 | 1.1e-07 | 0.79 | 0.02 | 0.98 | TRUE |
| 2 | GTEx | Prostate | GBAS | 0.33 | 0.08 | lasso | 8 | 0.13 | 3.4e-04 | -2.2 | -5.3 | 1.4e-07 | 0.58 | 0.09 | 0.52 | FALSE |
| 3 | METSIM | Adipose | PSPH | 0.16 | 0.13 | lasso | 15 | 0.17 | 2.9e-25 | -5.6 | -5.2 | 1.8e-07 | 0.77 | 0.02 | 0.98 | FALSE |