Best TWAS P=5.76e-08 · Best GWAS P=7.42e-07 conditioned to 0.75
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | TTC19 | 0.06 | 0.00 | lasso | 3 | 0.00 | 7.1e-01 | -4.6 | 5.3 | 1.3e-07 | -0.87 | 0.06 | 0.38 | FALSE |
2 | YFS | Blood | PIGL | 0.02 | 0.02 | blup | 279 | 0.02 | 1.5e-06 | -3.1 | -5.4 | 5.8e-08 | 0.88 | 0.20 | 0.76 | TRUE |