Best TWAS P=1.25e-08 · Best GWAS P=2.1e-07 conditioned to 0.0903
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Breast Mammary Tissue (Male) | CST7 | 0.15 | 0.0 | lasso | 4 | 0.03 | 7.0e-02 | -4.2 | -5.2 | 1.5e-07 | 0.62 | 0.05 | 0.06 | FALSE |
| 2 | ROSMAP | Brain Pre-frontal Cortex | ENTPD6 | 0.32 | 0.1 | bslmm | 432 | 0.12 | 1.8e-15 | 3.5 | 5.7 | 1.2e-08 | -0.70 | 0.65 | 0.15 | TRUE |