TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Whole body fat-free mass
:
←
→
chr4:53,494,816-54,463,824
Best TWAS P=6.65e-08 · Best GWAS P=6.09e-10 conditioned to 2.25e-08
53.6M
53.8M
54M
54.2M
54.4M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
SCFD2
0.07
0.06
lasso
2
0.05
7e-06
5.7
-5.4
6.7e-08
0.12
0.01
0.99
TRUE