Best TWAS P=1.01e-08 · Best GWAS P=6.42e-12 conditioned to 0.000107
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Artery Tibial | SENP6 | 0.08 | 0.00 | enet | 5 | 0.00 | 0.82400 | 5.8 | 5.7 | 1.0e-08 | 0.76 | 0.04 | 0.47 | TRUE |
| 2 | METSIM | Adipose | COL12A1 | 0.04 | 0.01 | blup | 309 | 0.02 | 0.00051 | -2.2 | -5.2 | 1.9e-07 | -0.48 | 0.12 | 0.53 | FALSE |