Best TWAS P=2.72e-08 · Best GWAS P=3.89e-09 conditioned to 0.000143
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Muscle Skeletal | KCTD9 | 0.11 | 0.07 | lasso | 5 | 0.06 | 7.9e-07 | -4.9 | -5.3 | 1.0e-07 | -0.56 | 0.14 | 0.85 | FALSE |
| 2 | The Cancer Genome Atlas | Lung Adenocarcinoma | KCTD9 | 0.03 | 0.01 | blup | 75 | 0.01 | 1.1e-02 | -5.7 | -5.6 | 2.7e-08 | -0.45 | 0.02 | 0.71 | TRUE |