TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Basal metabolic rate
:
←
→
chr4:57,127,848-58,522,810
Best TWAS P=8.57e-08 · Best GWAS P=1.5e-06 conditioned to 0.547
57.2M
57.4M
57.6M
57.8M
58M
58.2M
58.4M
58.6M
0
1
2
3
4
5
6
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
REST
0.04
0.01
lasso
5
0.02
7.8e-04
-4.8
-5.3
8.6e-08
0.84
0.01
0.90
TRUE
1
METSIM
Adipose
RP11-738E22.3
0.07
0.04
lasso
6
0.05
7.7e-08
-4.8
5.1
2.7e-07
-0.83
0.01
0.97
FALSE