Best TWAS P=8.5e-09 · Best GWAS P=1.38e-08 conditioned to 0.183
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | NT5C3 | 0.17 | 0.07 | enet | 14 | 0.10 | 7.0e-11 | -5.7 | -5.8 | 8.5e-09 | 0.87 | 0.00 | 1.00 | TRUE |
| 2 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | NT5C3 | 0.09 | 0.07 | lasso | 5 | 0.08 | 3.1e-05 | -5.6 | -5.2 | 2.5e-07 | 0.93 | 0.01 | 0.98 | FALSE |