6147 significantly associated models · 1238 unique genes
.
# | chr | p0 | p1 | # assoc genes | # joint genes | best TWAS P | best SNP P | cond SNP P | % var exp | joint genes |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1 | 752566 | 2761863 | 10 | 2 | 1.5e-15 | 1.1e-16 | 5.9e-01 | 100 | RP1-283E3.4 RP5-890O3.9 |
2 | 1 | 8655495 | 12013869 | 6 | 3 | 1.1e-15 | 1.1e-13 | 6.8e-12 | 15 | KIF1B RP4-635E18.7 SPSB1 |
3 | 1 | 15569712 | 16098866 | 1 | 1 | 2.6e-07 | 1.5e-05 | 2.2e-01 | 92 | CASP9 |
4 | 1 | 16142960 | 18132937 | 13 | 1 | 1.2e-11 | 2.2e-10 | 2.2e-02 | 87 | CROCC |
5 | 1 | 32664866 | 34592020 | 4 | 2 | 5.1e-13 | 6.0e-14 | 1.0e+00 | 100 | TMEM54 ZNF362 |
6 | 1 | 36314199 | 36888520 | 4 | 1 | 1.1e-08 | 1.2e-09 | 3.0e-03 | 76 | TRAPPC3 |
7 | 1 | 39182130 | 40737589 | 5 | 2 | 2.9e-11 | 1.9e-12 | 5.8e-03 | 85 | KIAA0754 PPIEL |
8 | 1 | 41253185 | 41957439 | 1 | 1 | 3.0e-08 | 1.0e-08 | 3.6e-03 | 74 | SCMH1 |
9 | 1 | 51510825 | 52049659 | 1 | 1 | 1.4e-07 | 3.9e-08 | 6.2e-03 | 75 | TTC39A |
10 | 1 | 71163715 | 73435171 | 1 | 1 | 4.6e-08 | 7.1e-12 | 1.4e-06 | 51 | NEGR1 |
11 | 1 | 77547831 | 79699821 | 3 | 1 | 4.0e-09 | 9.0e-12 | 2.8e-06 | 53 | DNAJB4 |
12 | 1 | 92277843 | 94120642 | 2 | 1 | 2.7e-09 | 1.4e-09 | 4.8e-02 | 89 | EVI5 |
13 | 1 | 96492298 | 97979726 | 1 | 1 | 2.1e-07 | 3.5e-10 | 1.4e-04 | 63 | PTBP2 |
14 | 1 | 109154974 | 110931112 | 9 | 1 | 1.3e-15 | 3.2e-15 | 7.6e-02 | 95 | SYPL2 |
15 | 1 | 111585148 | 114196883 | 4 | 2 | 2.1e-09 | 4.4e-09 | 4.0e-02 | 88 | RP4-773A18.4 SLC16A1 |
16 | 1 | 118878656 | 120380990 | 2 | 2 | 1.3e-11 | 5.4e-17 | 2.8e-02 | 93 | TBX15 WARS2 |
17 | 1 | 149672809 | 152126467 | 28 | 12 | 3.7e-30 | 4.4e-41 | NaN | NaN | ANP32E ARNT CTSS HIST2H2AA3 PSMB4 RP11-196G18.22 RP11-54A4.2 RPRD2 SV2A TARS2 |
18 | 1 | 153973171 | 156405037 | 19 | 11 | 3.3e-36 | 3.2e-36 | 1.0e+00 | 100 | ADAM15 KCNN3 MUC1 PBXIP1 RAG1AP1 THBS3 TRIM46 ZBTB7B |
19 | 1 | 172881827 | 175663031 | 8 | 1 | 4.4e-10 | 2.7e-10 | 1.7e-01 | 95 | SERPINC1 |
20 | 1 | 177195050 | 178702875 | 4 | 1 | 1.8e-13 | 1.8e-42 | 8.9e-32 | 26 | RP11-568K15.1 |
21 | 1 | 201099275 | 202607593 | 4 | 1 | 4.6e-17 | 6.8e-18 | 1.0e+00 | 100 | LMOD1 |
22 | 1 | 204991770 | 206329620 | 1 | 1 | 2.4e-07 | 1.5e-06 | 3.2e-01 | 96 | NUCKS1 |
23 | 1 | 211765485 | 213229337 | 1 | 1 | 1.4e-07 | 1.4e-09 | 1.0e+00 | 100 | PPP2R5A |
24 | 1 | 218648556 | 220082150 | 1 | 1 | 1.6e-14 | 9.9e-21 | 1.5e-08 | 63 | LYPLAL1 |
25 | 1 | 220359347 | 221753645 | 1 | 1 | 1.9e-14 | 5.1e-18 | 6.4e-07 | 67 | HLX |
26 | 1 | 224894095 | 226313525 | 2 | 1 | 1.6e-08 | 3.3e-08 | 2.5e-05 | 42 | LBR |
27 | 1 | 226371939 | 228204326 | 4 | 2 | 7.5e-10 | 1.2e-11 | 1.1e-03 | 77 | ADCK3 PSEN2 |
28 | 2 | 15703 | 1384725 | 5 | 6 | 1.4e-15 | 3.1e-53 | 5.6e-26 | 53 | AC092159.2 SH3YL1 TMEM18 |
29 | 2 | 23453834 | 26088769 | 6 | 2 | 2.5e-11 | 3.3e-12 | 4.0e-10 | 19 | POMC UBXN2A |
30 | 2 | 26883355 | 29260106 | 11 | 6 | 4.8e-34 | 3.2e-30 | 1.0e+00 | 100 | AC074117.10 FNDC4 MRPL33 NRBP1 SUPT7L |
31 | 2 | 32483593 | 34319972 | 1 | 1 | 1.9e-09 | 5.8e-10 | 9.5e-02 | 93 | LTBP1 |
32 | 2 | 42767044 | 44157441 | 1 | 1 | 1.9e-08 | 2.6e-10 | 1.3e-03 | 74 | AC010883.5 |
33 | 2 | 55401562 | 56843605 | 1 | 1 | 1.7e-07 | 5.7e-14 | 1.2e-08 | 42 | EFEMP1 |
34 | 2 | 104957361 | 106413077 | 1 | 1 | 4.0e-08 | 8.5e-10 | 5.3e-04 | 68 | MRPS9 |
35 | 2 | 127113672 | 128561279 | 1 | 1 | 1.2e-08 | 4.5e-09 | 1.3e-01 | 93 | BIN1 |
36 | 2 | 151570279 | 153056846 | 1 | 1 | 5.9e-08 | 5.5e-08 | 1.2e-01 | 92 | RIF1 |
37 | 2 | 160879651 | 161592249 | 1 | 1 | 2.7e-10 | 2.0e-10 | 1.7e-01 | 95 | RBMS1 |
38 | 2 | 171683107 | 173114238 | 1 | 1 | 5.0e-23 | 4.1e-25 | 2.5e-04 | 88 | CYBRD1 |
39 | 2 | 175348838 | 177746117 | 5 | 3 | 1.8e-14 | 2.5e-14 | 9.8e-02 | 95 | ATP5G3 HOXD11 HOXD-AS1 |
40 | 2 | 182305254 | 184084221 | 1 | 1 | 1.4e-09 | 4.4e-12 | 4.0e-05 | 65 | PDE1A |
41 | 2 | 189611749 | 191029604 | 2 | 1 | 8.4e-12 | 9.8e-12 | 1.9e-03 | 79 | COL5A2 |
42 | 2 | 197134790 | 200117777 | 7 | 1 | 1.9e-32 | 1.8e-32 | 1.0e+00 | 100 | MARS2 |
43 | 2 | 200134004 | 201571143 | 1 | 1 | 3.0e-07 | 2.6e-07 | 1.9e-01 | 94 | C2orf47 |
44 | 2 | 202651129 | 203152355 | 1 | 1 | 4.5e-08 | 4.9e-09 | 1.1e-02 | 81 | FZD7 |
45 | 2 | 205851076 | 207874372 | 7 | 1 | 1.6e-12 | 7.1e-12 | 4.4e-01 | 99 | NDUFS1 |
46 | 2 | 217908472 | 221058583 | 11 | 4 | 9.3e-13 | 3.1e-15 | 1.9e-02 | 91 | DIRC3 RP11-316O14.1 RQCD1 |
47 | 2 | 225574650 | 227217161 | 1 | 1 | 6.6e-10 | 1.2e-25 | 2.1e-17 | 34 | NYAP2 |
48 | 2 | 240826197 | 242812080 | 5 | 2 | 1.9e-14 | 2.0e-14 | 2.2e-05 | 69 | CAPN10-AS1 PASK |
49 | 3 | 10483958 | 13169322 | 4 | 3 | 4.4e-11 | 3.6e-17 | 1.1e-08 | 54 | ATG7 HRH1 PPARG |
50 | 3 | 13456382 | 14942024 | 3 | 1 | 3.1e-13 | 2.7e-10 | 1.8e-09 | 9 | CHCHD4 |
51 | 3 | 19382787 | 20893060 | 1 | 1 | 1.3e-08 | 3.4e-09 | 4.1e-05 | 52 | KAT2B |
52 | 3 | 37692342 | 39280382 | 5 | 1 | 2.2e-25 | 8.3e-25 | 1.0e+00 | 100 | EXOG |
53 | 3 | 41948665 | 43544836 | 4 | 1 | 3.7e-13 | 4.5e-13 | 1.2e-01 | 95 | HHATL |
54 | 3 | 48012797 | 53860103 | 76 | 7 | 2.3e-45 | 9.8e-32 | NaN | NaN | HEMK1 NCKIPSD NEK4 RASSF1 RBM6 TEX264 |
55 | 3 | 84317575 | 86808226 | 1 | 1 | 2.1e-22 | 6.7e-21 | 1.0e+00 | 100 | CADM2 |
56 | 3 | 87508781 | 88901377 | 1 | 1 | 2.3e-07 | 1.8e-07 | 1.6e-04 | 48 | C3orf38 |
57 | 3 | 127175889 | 128821807 | 1 | 1 | 1.9e-07 | 1.3e-05 | 1.2e-01 | 88 | EEFSEC |
58 | 3 | 133088362 | 134666475 | 1 | 1 | 7.2e-10 | 4.4e-10 | 9.0e-05 | 61 | RYK |
59 | 3 | 134986214 | 137368142 | 7 | 1 | 1.1e-15 | 9.8e-15 | 2.3e-02 | 91 | SLC35G2 |
60 | 3 | 156165788 | 157574195 | 1 | 1 | 1.4e-07 | 1.2e-08 | 1.7e-02 | 82 | CCNL1 |
61 | 3 | 183178933 | 184700426 | 6 | 2 | 1.9e-18 | 3.8e-19 | 2.1e-03 | 88 | PSMD2 VWA5B2 |
62 | 3 | 185520342 | 186072370 | 1 | 1 | 4.1e-23 | 2.1e-25 | 6.6e-05 | 85 | ETV5 |
63 | 4 | 352955 | 1797852 | 1 | 1 | 4.9e-08 | 3.2e-07 | 3.8e-01 | 97 | RNF212 |
64 | 4 | 24422187 | 27132182 | 5 | 2 | 2.8e-16 | 5.9e-16 | 1.0e+00 | 100 | ANAPC4 RBPJ |
65 | 4 | 55582068 | 58593295 | 5 | 2 | 1.4e-12 | 3.4e-10 | 4.5e-02 | 90 | CLOCK POLR2B |
66 | 4 | 82578407 | 83991529 | 1 | 1 | 8.7e-11 | 1.2e-12 | 3.5e-03 | 83 | HNRNPD |
67 | 4 | 86236934 | 88430396 | 2 | 1 | 2.0e-11 | 5.5e-09 | 1.8e-02 | 84 | PTPN13 |
68 | 4 | 88471516 | 88981690 | 1 | 1 | 1.7e-07 | 1.1e-07 | 5.9e-02 | 87 | IBSP |
69 | 4 | 102852939 | 104815937 | 6 | 1 | 2.0e-10 | 9.9e-09 | 2.5e-01 | 96 | CENPE |
70 | 4 | 119408351 | 121242474 | 8 | 6 | 1.4e-19 | 3.1e-19 | 1.0e+00 | 100 | LOC645513 PDE5A RP11-33B1.4 USP53 |
71 | 4 | 122494838 | 124496928 | 3 | 2 | 5.8e-08 | 1.6e-07 | 1.1e-05 | 30 | BBS12 CCNA2 |
72 | 5 | 36684550 | 38450430 | 1 | 1 | 2.3e-07 | 8.3e-10 | 2.5e-04 | 64 | WDR70 |
73 | 5 | 41726855 | 44403631 | 6 | 3 | 1.2e-09 | 1.3e-11 | 2.0e-03 | 79 | C5orf34 CCDC152 GHR |
74 | 5 | 52157374 | 53672849 | 1 | 2 | 2.0e-09 | 2.1e-18 | 1.5e-07 | 64 | NDUFS4 |
75 | 5 | 55509554 | 56923759 | 4 | 1 | 1.6e-11 | 3.0e-23 | 3.6e-21 | 10 | SETD9 |
76 | 5 | 59353199 | 60936935 | 3 | 1 | 5.1e-09 | 2.9e-12 | 1.1e-05 | 60 | GNL3LP1 |
77 | 5 | 62764129 | 65866903 | 3 | 2 | 2.0e-12 | 1.3e-17 | 6.8e-12 | 36 | RNF180 SGTB |
78 | 5 | 73626450 | 75704085 | 8 | 1 | 1.4e-19 | 8.7e-22 | 9.1e-04 | 88 | POC5 |
79 | 5 | 87006055 | 88875673 | 3 | 2 | 8.6e-12 | 7.2e-18 | 7.1e-15 | 18 | LINC00461 MEF2C |
80 | 5 | 101392473 | 103061825 | 1 | 1 | 7.9e-09 | 4.5e-09 | 2.0e-02 | 84 | PAM |
81 | 5 | 106016464 | 109224099 | 3 | 3 | 1.8e-14 | 7.8e-15 | 3.5e-01 | 99 | EFNA5 FER LINC01023 |
82 | 5 | 122045488 | 123432250 | 3 | 1 | 7.7e-14 | 1.0e-18 | 2.5e-06 | 72 | CEP120 |
83 | 5 | 125679739 | 128220643 | 5 | 4 | 6.2e-38 | 1.1e-34 | 1.0e+00 | 100 | C5orf63 CTC-228N24.3 SLC12A2 |
84 | 5 | 129797129 | 131202801 | 2 | 1 | 1.3e-10 | 3.7e-09 | 1.8e-03 | 72 | HINT1 |
85 | 5 | 133164490 | 134612693 | 1 | 1 | 2.6e-10 | 1.6e-12 | 1.8e-11 | 10 | PHF15 |
86 | 5 | 136723696 | 138110702 | 1 | 1 | 1.4e-11 | 1.0e-13 | 3.5e-04 | 77 | WNT8A |
87 | 5 | 138349164 | 139975466 | 1 | 1 | 1.4e-09 | 8.0e-10 | 6.1e-06 | 46 | CXXC5 |
88 | 5 | 140062547 | 141722865 | 1 | 1 | 1.1e-07 | 2.4e-11 | 5.1e-05 | 63 | FCHSD1 |
89 | 5 | 176040488 | 177260129 | 4 | 2 | 1.7e-16 | 1.6e-24 | 4.8e-02 | 96 | FGFR4 MXD3 |
90 | 5 | 177789202 | 179203479 | 1 | 1 | 2.6e-09 | 2.4e-09 | 2.7e-01 | 97 | ZNF354C |
91 | 6 | 33551514 | 36158878 | 7 | 9 | 1.6e-22 | 5.3e-22 | NaN | NaN | C6orf106 NUDT3 RPS10 SNRPC TEAD3 UHRF1BP1 |
92 | 6 | 39019503 | 39530428 | 1 | 1 | 1.2e-08 | 5.1e-08 | 7.5e-03 | 76 | KCNK17 |
93 | 6 | 41005502 | 42587818 | 4 | 1 | 1.8e-14 | 4.0e-13 | 1.0e+00 | 100 | MED20 |
94 | 6 | 44079216 | 46043561 | 1 | 1 | 1.4e-12 | 1.4e-12 | 1.0e+00 | 100 | SUPT3H |
95 | 6 | 87167376 | 88880701 | 6 | 1 | 2.2e-10 | 1.2e-10 | 5.0e-03 | 81 | C6orf164 |
96 | 6 | 100257579 | 102026932 | 2 | 1 | 3.1e-10 | 8.5e-11 | 8.7e-02 | 93 | ASCC3 |
97 | 6 | 104478130 | 106230491 | 2 | 1 | 5.0e-14 | 2.5e-22 | 6.9e-10 | 60 | LIN28B |
98 | 6 | 108183628 | 109704062 | 1 | 1 | 3.3e-08 | 2.9e-13 | 6.9e-07 | 54 | FOXO3 |
99 | 7 | 511203 | 1618854 | 3 | 1 | 4.2e-09 | 3.0e-13 | 2.1e-16 | -27 | SUN1 |
100 | 7 | 1787236 | 3183657 | 1 | 1 | 2.0e-07 | 1.4e-06 | 4.5e-03 | 65 | AC004840.9 |
101 | 7 | 26326117 | 26823963 | 1 | 1 | 7.1e-08 | 5.3e-07 | 6.5e-06 | 19 | KIAA0087 |
102 | 7 | 27623776 | 28468319 | 1 | 2 | 1.1e-17 | 1.7e-19 | 2.5e-06 | 73 | JAZF1 |
103 | 7 | 32817202 | 33346932 | 1 | 1 | 8.5e-09 | 1.4e-08 | 1.8e-01 | 94 | NT5C3 |
104 | 7 | 34276627 | 35772982 | 1 | 1 | 1.2e-08 | 6.6e-09 | 3.6e-02 | 87 | DPY19L1 |
105 | 7 | 38513924 | 39195671 | 1 | 1 | 2.6e-07 | 6.8e-09 | 8.4e-07 | 28 | VPS41 |
106 | 7 | 43384376 | 44776574 | 2 | 1 | 1.1e-08 | 7.6e-07 | 8.8e-01 | 100 | POLR2J4 |
107 | 7 | 45255940 | 46658015 | 1 | 1 | 4.8e-08 | 4.3e-21 | 5.6e-18 | 16 | IGFBP3 |
108 | 7 | 71652312 | 77744459 | 25 | 18 | 9.6e-18 | 5.1e-17 | 1.0e+00 | 100 | BCL7B DTX2P1-UPK3BP1-PMS2P11 GSAP MLXIPL NSUN5P2 PMS2L11 PMS2P3 POM121 STAG3L1 STAG3L2 TRIM73 |
109 | 7 | 89097580 | 90553586 | 2 | 1 | 7.4e-08 | 6.8e-08 | 9.1e-02 | 90 | GTPBP10 |
110 | 7 | 98774738 | 101051925 | 10 | 3 | 2.8e-09 | 7.2e-09 | 4.6e-01 | 98 | LAMTOR4 TRIM4 VGF |
111 | 7 | 101626640 | 103015677 | 1 | 1 | 5.2e-09 | 5.4e-06 | 6.3e-02 | 83 | RASA4DP |
112 | 7 | 126529931 | 127931324 | 1 | 1 | 2.5e-07 | 1.0e-07 | 5.5e-02 | 87 | GCC1 |
113 | 8 | 8092025 | 13120332 | 42 | 1 | 7.8e-27 | 7.7e-24 | 3.9e-02 | 96 | AF131215.9 |
114 | 8 | 32522626 | 34052327 | 3 | 1 | 8.7e-10 | 6.8e-07 | 6.2e-01 | 99 | FUT10 |
115 | 8 | 37329315 | 38989813 | 7 | 1 | 4.7e-10 | 6.5e-10 | 7.1e-02 | 91 | RP11-90P5.2 |
116 | 8 | 56269387 | 57683880 | 3 | 1 | 2.0e-11 | 9.1e-14 | 5.4e-04 | 78 | RPS20 |
117 | 8 | 58778118 | 60190231 | 1 | 1 | 4.2e-09 | 1.5e-08 | 1.4e-01 | 93 | SDCBP |
118 | 8 | 66679221 | 68096452 | 1 | 1 | 2.6e-07 | 1.6e-08 | 1.5e-03 | 68 | C8orf46 |
119 | 8 | 73634872 | 75355842 | 1 | 1 | 1.2e-08 | 9.2e-12 | 1.9e-04 | 70 | STAU2 |
120 | 8 | 88801153 | 89582625 | 1 | 1 | 4.2e-22 | 5.3e-24 | 2.9e-04 | 87 | MMP16 |
121 | 8 | 94690786 | 96276292 | 3 | 1 | 2.6e-14 | 2.4e-13 | 1.2e-02 | 88 | KIAA1429 |
122 | 8 | 101232701 | 102664291 | 1 | 1 | 2.7e-08 | 2.0e-07 | 6.7e-01 | 99 | YWHAZ |
123 | 8 | 140969818 | 142706843 | 1 | 1 | 6.2e-08 | 2.5e-07 | 5.6e-02 | 86 | PTK2 |
124 | 8 | 144526905 | 146233840 | 3 | 1 | 5.1e-10 | 4.5e-12 | 2.0e-03 | 80 | MROH1 |
125 | 9 | 5091675 | 6697128 | 2 | 1 | 2.1e-08 | 7.5e-12 | 4.2e-05 | 64 | RANBP6 |
126 | 9 | 12410173 | 13977570 | 1 | 1 | 3.9e-10 | 5.9e-11 | 3.6e-02 | 90 | MPDZ |
127 | 9 | 18417189 | 19844265 | 1 | 1 | 4.6e-08 | 7.7e-09 | 1.4e-02 | 82 | PLIN2 |
128 | 9 | 33414173 | 35374982 | 2 | 1 | 3.4e-09 | 2.3e-08 | 5.2e-02 | 88 | DCAF12 |
129 | 9 | 76864766 | 78266575 | 1 | 1 | 1.7e-07 | 1.2e-05 | 7.5e-02 | 83 | C9orf40 |
130 | 9 | 85657836 | 87315117 | 4 | 2 | 3.1e-12 | 7.2e-11 | 2.2e-01 | 96 | RMI1 UBQLN1 |
131 | 9 | 94363366 | 97136378 | 9 | 2 | 3.1e-19 | 5.6e-19 | 1.0e+00 | 100 | NOL8 PHF2 |
132 | 9 | 102374475 | 103803109 | 2 | 1 | 1.9e-08 | 1.2e-08 | 1.0e+00 | 100 | TEX10 |
133 | 9 | 110932294 | 112472083 | 2 | 1 | 1.4e-12 | 6.8e-08 | 2.1e-02 | 82 | CTNNAL1 |
134 | 9 | 116404085 | 117853103 | 1 | 1 | 1.4e-08 | 1.1e-08 | 2.5e-02 | 85 | AKNA |
135 | 9 | 126321003 | 129961152 | 7 | 3 | 3.3e-11 | 2.5e-11 | 2.8e-03 | 80 | GAPVD1 MVB12B PSMB7 |
136 | 9 | 133571587 | 135074103 | 2 | 1 | 1.6e-08 | 7.4e-10 | 2.7e-06 | 42 | PRRC2B |
137 | 9 | 135883620 | 136399075 | 1 | 1 | 2.3e-09 | 4.2e-13 | 4.0e-05 | 68 | ABO |
138 | 9 | 138403706 | 139836362 | 1 | 1 | 1.9e-09 | 5.5e-09 | 6.0e-06 | 40 | QSOX2 |
139 | 10 | 22131659 | 23698033 | 1 | 1 | 6.0e-08 | 6.0e-08 | 1.0e+00 | 100 | PIP4K2A |
140 | 10 | 26751003 | 28172343 | 2 | 1 | 4.8e-08 | 1.1e-07 | 2.3e-06 | 21 | MASTL |
141 | 10 | 64195778 | 65911294 | 4 | 1 | 9.6e-11 | 1.1e-10 | 1.2e-01 | 94 | NRBF2 |
142 | 10 | 69623057 | 71150635 | 1 | 1 | 2.5e-07 | 4.7e-09 | 1.4e-03 | 70 | TET1 |
143 | 10 | 71736472 | 73345380 | 2 | 2 | 6.6e-17 | 4.9e-22 | 9.9e-01 | 100 | ADAMTS14 PCBD1 |
144 | 10 | 75064567 | 79018276 | 3 | 2 | 1.3e-18 | 1.0e-17 | 6.3e-01 | 100 | C10orf11 VCL |
145 | 10 | 95019584 | 98649296 | 7 | 7 | 1.6e-17 | 4.2e-34 | 7.8e-10 | 74 | CYP2C8 HELLS NOC3L PLCE1 ZNF518A |
146 | 10 | 99204526 | 100903446 | 3 | 1 | 9.9e-15 | 2.7e-16 | 7.2e-05 | 76 | R3HCC1L |
147 | 10 | 101975269 | 106371784 | 17 | 9 | 1.2e-17 | 1.5e-17 | 1.0e+00 | 100 | ACTR1A AS3MT CNNM2 OBFC1 RP11-179B2.2 RP11-18I14.10 SFXN2 SUFU TMEM180 |
148 | 11 | 198510 | 1702321 | 18 | 2 | 1.7e-12 | 2.9e-13 | 1.3e-01 | 96 | AP006621.5 PSMD13 |
149 | 11 | 8920704 | 11227175 | 6 | 2 | 2.8e-17 | 2.1e-22 | 7.7e-05 | 84 | ADM AMPD3 |
150 | 11 | 16343081 | 18106069 | 8 | 2 | 2.5e-12 | 3.8e-11 | 4.3e-01 | 99 | ABCC8 DKFZp686O24166 |
151 | 11 | 26818083 | 28416646 | 3 | 3 | 2.7e-13 | 2.9e-34 | 8.9e-08 | 81 | BDNF-AS BDNFOS LIN7C |
152 | 11 | 29646947 | 32486962 | 5 | 3 | 1.8e-08 | 2.2e-09 | 3.0e-01 | 97 | ARL14EP ELP4 MPPED2 |
153 | 11 | 42881882 | 44596817 | 2 | 1 | 2.8e-10 | 6.9e-09 | 1.0e+00 | 100 | HSD17B12 |
154 | 11 | 61664757 | 63284510 | 10 | 1 | 1.2e-10 | 1.2e-10 | 1.0e+00 | 100 | ROM1 |
155 | 11 | 64501991 | 70179848 | 36 | 13 | 2.0e-21 | 1.9e-19 | 1.0e+00 | 100 | CCND1 EFEMP2 IGHMBP2 LRFN4 MRGPRF MRPL21 ORAOV1 RAD9A SAPS3 |
156 | 11 | 77204866 | 78979645 | 4 | 1 | 2.0e-09 | 7.6e-10 | 1.1e-01 | 93 | GAB2 |
157 | 11 | 85456242 | 87349407 | 2 | 1 | 8.4e-09 | 2.5e-10 | 5.3e-03 | 81 | PRSS23 |
158 | 11 | 114340771 | 116072203 | 1 | 1 | 8.9e-09 | 1.6e-11 | 3.5e-04 | 72 | CADM1 |
159 | 11 | 118730669 | 119207928 | 1 | 1 | 1.7e-07 | 2.5e-05 | 5.6e-03 | 57 | HMBS |
160 | 12 | 191619 | 1711109 | 1 | 1 | 4.2e-13 | 6.1e-13 | 6.1e-07 | 52 | WNK1 |
161 | 12 | 41777144 | 43679700 | 4 | 2 | 9.5e-09 | 5.1e-09 | 4.4e-01 | 98 | PPHLN1 PRICKLE1 |
162 | 12 | 45363545 | 47465082 | 2 | 2 | 4.1e-22 | 2.7e-22 | 2.9e-03 | 91 | ANO6 SLC38A2 |
163 | 12 | 47671905 | 52022819 | 22 | 6 | 1.8e-20 | 9.5e-20 | 1.6e-02 | 93 | ATF1 CERS5 LMBR1L TMEM106C |
164 | 12 | 53926889 | 55370164 | 6 | 6 | 3.9e-12 | 2.0e-10 | NaN | NaN | CBX5 FLJ12825 HOXC6 HOXC8 LOC400043 |
165 | 12 | 55677395 | 59016962 | 14 | 3 | 2.5e-17 | 2.6e-14 | 1.6e-02 | 90 | METTL21B PRIM1 RPS26 |
166 | 12 | 67344378 | 68755669 | 1 | 1 | 6.2e-08 | 5.5e-08 | 1.0e+00 | 100 | DYRK2 |
167 | 12 | 104871892 | 106319548 | 1 | 1 | 1.9e-08 | 5.8e-08 | 4.9e-02 | 87 | APPL2 |
168 | 12 | 110233500 | 111634281 | 1 | 1 | 2.9e-07 | 6.5e-09 | 5.6e-06 | 39 | VPS29 |
169 | 12 | 111910219 | 113517494 | 1 | 1 | 1.2e-07 | 1.1e-14 | 8.2e-09 | 44 | HECTD4 |
170 | 12 | 120044549 | 121443116 | 1 | 1 | 1.6e-07 | 2.6e-09 | 6.0e-08 | 17 | SIRT4 |
171 | 12 | 123558705 | 125196704 | 5 | 1 | 2.6e-11 | 6.9e-11 | 1.7e-07 | 36 | CCDC92 |
172 | 12 | 132505406 | 133778796 | 1 | 1 | 3.9e-08 | 1.8e-07 | 2.3e-01 | 95 | POLE |
173 | 13 | 27749313 | 28258072 | 1 | 1 | 1.4e-07 | 4.0e-06 | 9.9e-02 | 87 | GTF3A |
174 | 13 | 50592874 | 52109040 | 1 | 1 | 8.4e-12 | 5.6e-19 | 1.4e-09 | 54 | DLEU7 |
175 | 13 | 72935038 | 74345759 | 1 | 1 | 4.0e-08 | 7.3e-10 | 5.3e-03 | 80 | KLF5 |
176 | 13 | 75401406 | 76905589 | 3 | 1 | 3.3e-09 | 1.2e-09 | 4.5e-02 | 89 | COMMD6 |
177 | 13 | 78225526 | 78792230 | 1 | 1 | 1.9e-12 | 1.6e-12 | 9.0e-02 | 94 | EDNRB |
178 | 13 | 95632770 | 97132111 | 1 | 1 | 3.2e-10 | 3.2e-12 | 2.3e-03 | 81 | DNAJC3 |
179 | 13 | 114457173 | 115106996 | 1 | 1 | 1.9e-07 | 4.7e-06 | 7.1e-04 | 45 | UPF3A |
180 | 14 | 22600863 | 23996772 | 1 | 1 | 2.5e-09 | 1.9e-09 | 1.3e-02 | 83 | MRPL52 |
181 | 14 | 34696729 | 36483802 | 5 | 1 | 1.5e-09 | 3.7e-09 | 1.0e+00 | 100 | FAM177A1 |
182 | 14 | 55273730 | 56741515 | 1 | 1 | 3.2e-09 | 6.3e-11 | 1.0e+00 | 100 | KTN1-AS1 |
183 | 14 | 59862624 | 61328990 | 1 | 1 | 9.9e-08 | 2.3e-08 | 3.1e-03 | 72 | PCNXL4 |
184 | 14 | 72386949 | 74627634 | 5 | 1 | 2.0e-13 | 4.6e-11 | 7.4e-04 | 74 | DPF3 |
185 | 14 | 79965456 | 81549533 | 1 | 1 | 3.7e-11 | 1.8e-13 | 1.1e-03 | 80 | DIO2 |
186 | 14 | 90643934 | 94495324 | 4 | 5 | 9.9e-22 | 2.5e-21 | 1.0e+00 | 100 | BTBD7 RIN3 RPS6KA5 |
187 | 14 | 101910147 | 104866687 | 11 | 2 | 1.3e-10 | 4.0e-11 | 3.1e-02 | 89 | MARK3 WDR20 |
188 | 15 | 30930500 | 31932865 | 1 | 1 | 3.9e-08 | 1.4e-07 | 8.5e-02 | 89 | FAN1 |
189 | 15 | 41497427 | 42957373 | 2 | 1 | 5.1e-08 | 3.9e-09 | 1.7e-07 | 21 | EHD4 |
190 | 15 | 43227515 | 44640866 | 1 | 1 | 2.2e-07 | 9.5e-08 | 4.0e-03 | 71 | CATSPER2 |
191 | 15 | 44959112 | 46410543 | 3 | 1 | 3.3e-10 | 4.3e-10 | 3.0e-01 | 97 | GATM |
192 | 15 | 61987998 | 63831984 | 1 | 1 | 1.1e-08 | 3.6e-09 | 1.2e-01 | 93 | TLN2 |
193 | 15 | 65888692 | 69178312 | 6 | 4 | 3.7e-13 | 6.3e-14 | 1.5e-01 | 96 | DIS3L LBXCOR1 PIAS1 SMAD3 |
194 | 15 | 73524629 | 75159433 | 5 | 2 | 4.3e-15 | 3.7e-19 | 5.5e-05 | 80 | ISLR LOXL1-AS1 |
195 | 15 | 76398193 | 78806023 | 9 | 1 | 5.8e-21 | 2.6e-17 | 2.3e-01 | 98 | TSPAN3 |
196 | 15 | 83632164 | 86040394 | 14 | 10 | 4.5e-48 | 2.1e-78 | NaN | NaN | AC103965.1 GOLGA6L5 RN7SL417P RP11-182J1.14 RP11-182J1.16 ZNF592 |
197 | 15 | 89192873 | 89701439 | 1 | 1 | 7.3e-11 | 3.1e-40 | 5.4e-31 | 24 | MFGE8 |
198 | 15 | 99816860 | 101559136 | 2 | 2 | 3.9e-17 | 1.5e-13 | 5.3e-02 | 93 | ADAMTS17 CTD-3076O17.1 |
199 | 16 | 711905 | 4696654 | 12 | 4 | 8.8e-10 | 2.6e-14 | 3.2e-07 | 55 | CRAMP1L MLST8 NLRC3 RP11-462G12.1 |
200 | 16 | 19016966 | 21147999 | 8 | 2 | 9.6e-29 | 1.8e-26 | 1.0e+00 | 100 | ACSM5 GPRC5B |
201 | 16 | 24301701 | 24829178 | 1 | 1 | 7.6e-10 | 1.2e-14 | 3.5e-07 | 56 | RBBP6 |
202 | 16 | 28825605 | 32137965 | 52 | 5 | 1.4e-36 | 2.3e-28 | NaN | NaN | ALDOA FUS VKORC1 ZNF646 ZNF720 |
203 | 16 | 49403920 | 50831256 | 3 | 1 | 2.4e-10 | 3.1e-09 | 2.4e-01 | 96 | RP11-429P3.3 |
204 | 16 | 52772129 | 54846383 | 3 | 3 | 9.3e-41 | 1.5e-154 | 3.4e-78 | 50 | AKTIP FTO |
205 | 16 | 55526487 | 57089130 | 1 | 1 | 9.3e-08 | 6.7e-08 | 1.0e+00 | 100 | GNAO1 |
206 | 16 | 66737479 | 69084178 | 7 | 3 | 2.1e-10 | 3.0e-11 | 1.3e-01 | 95 | ATP6V0D1 NFATC3 PRMT7 |
207 | 16 | 69559696 | 70978362 | 2 | 1 | 2.4e-08 | 7.7e-08 | 2.5e-01 | 96 | RP11-296I10.6 |
208 | 16 | 75019070 | 75539885 | 1 | 1 | 3.0e-14 | 1.2e-16 | 6.0e-04 | 83 | BCAR1 |
209 | 16 | 88934149 | 90172696 | 2 | 2 | 1.4e-07 | 2.1e-06 | 9.9e-03 | 70 | MC1R RPL13 |
210 | 17 | 923916 | 3113575 | 8 | 8 | 2.6e-16 | 1.2e-17 | NaN | NaN | LOC284009 METTL16 MNT PAFAH1B1 RP1-59D14.1 SMG6 WDR81 |
211 | 17 | 6679294 | 8173767 | 6 | 2 | 2.0e-11 | 2.5e-09 | 2.0e-02 | 85 | TNFSF12 ZBTB4 |
212 | 17 | 20608648 | 22010013 | 1 | 1 | 4.8e-08 | 7.3e-08 | 8.8e-02 | 90 | KCNJ12 |
213 | 17 | 29398369 | 31275580 | 3 | 2 | 1.5e-07 | 1.4e-07 | 1.0e+00 | 100 | EVI2A RHOT1 |
214 | 17 | 34204807 | 35644076 | 3 | 1 | 6.0e-08 | 2.0e-08 | 1.6e-07 | 13 | GGNBP2 |
215 | 17 | 38957953 | 41393295 | 8 | 2 | 2.7e-10 | 5.8e-08 | 1.2e-07 | 5 | CNP NAGLU |
216 | 17 | 42138392 | 48347817 | 51 | 15 | 1.0e-21 | 2.4e-30 | NaN | NaN | ADAM11 CALCOCO2 CRHR1-IT1 DCAKD HOXB-AS1 PHOSPHO1 RP5-890E16.2 SCRN2 SNX11 TTLL6 ZNF652 |
217 | 17 | 61106371 | 62694738 | 6 | 1 | 2.8e-11 | 7.3e-12 | 1.0e+00 | 100 | PSMC5 |
218 | 17 | 77072043 | 81051007 | 4 | 3 | 8.9e-11 | 2.7e-11 | 2.5e-06 | 50 | BAIAP2 CBX8 WDR45B |
219 | 18 | 2912920 | 4304557 | 1 | 1 | 2.1e-07 | 1.0e-08 | 1.2e-02 | 81 | DLGAP1-AS2 |
220 | 18 | 56399379 | 58729694 | 2 | 2 | 5.9e-28 | 3.2e-100 | 2.8e-67 | 34 | CCBE1 MC4R |
221 | 18 | 71224566 | 72650685 | 1 | 1 | 4.3e-08 | 5.3e-08 | 1.1e-01 | 92 | CYB5A |
222 | 19 | 1127720 | 2862806 | 4 | 2 | 5.5e-12 | 4.5e-10 | 1.0e-03 | 72 | AP3D1 REXO1 |
223 | 19 | 3268722 | 5153606 | 6 | 1 | 4.5e-13 | 9.7e-12 | 3.0e-03 | 81 | UBXN6 |
224 | 19 | 6419098 | 11140703 | 16 | 12 | 4.4e-16 | 1.6e-17 | NaN | NaN | CTD-2623N2.3 EVI5L INSR MARCH2 RAVER1 XAB2 ZNF121 ZNF266 ZNF559 ZNF699 |
225 | 19 | 16462417 | 20451172 | 25 | 5 | 6.9e-18 | 2.6e-16 | 6.4e-02 | 95 | HAPLN4 KIAA1683 MYO9B OCEL1 PGPEP1 |
226 | 19 | 30056335 | 30557251 | 1 | 1 | 6.8e-09 | 1.7e-09 | 2.8e-02 | 87 | CCNE1 |
227 | 19 | 33592301 | 35003390 | 1 | 1 | 4.3e-12 | 9.1e-13 | 1.0e+00 | 100 | KCTD15 |
228 | 19 | 37711656 | 39396649 | 1 | 1 | 1.4e-07 | 6.1e-07 | 9.6e-03 | 73 | SIPA1L3 |
229 | 19 | 45286263 | 48406374 | 5 | 4 | 5.1e-18 | 2.0e-37 | 4.0e-21 | 46 | FOSB GRLF1 PNMAL1 SAE1 |
230 | 19 | 48931222 | 51224297 | 13 | 2 | 3.0e-12 | 3.1e-11 | 2.3e-01 | 97 | AP2A1 SNRNP70 |
231 | 20 | 20407782 | 21919054 | 1 | 1 | 4.6e-11 | 1.3e-11 | 1.0e+00 | 100 | PLK1S1 |
232 | 20 | 31382860 | 35512648 | 34 | 8 | 4.8e-14 | 8.6e-13 | NaN | NaN | C20orf152 CEP250 ERGIC3 MAP1LC3A PXMP4 RALY TP53INP2 UQCC |
233 | 20 | 42040938 | 43508687 | 1 | 1 | 2.5e-07 | 1.2e-13 | 2.5e-11 | 19 | JPH2 |
234 | 20 | 49975801 | 51518982 | 1 | 1 | 9.0e-12 | 4.7e-16 | 3.3e-06 | 67 | ZFP64 |
235 | 20 | 61667526 | 62912463 | 5 | 2 | 5.3e-09 | 3.6e-09 | 1.0e+00 | 100 | OPRL1 SLC2A4RG |
236 | 22 | 19262852 | 20330744 | 5 | 2 | 2.1e-10 | 4.2e-09 | 2.5e-01 | 96 | AC006547.14 AC006547.15 |
237 | 22 | 20732809 | 21034809 | 1 | 1 | 1.2e-08 | 4.1e-10 | 8.1e-03 | 82 | SCARF2 |
238 | 22 | 28794069 | 30261219 | 1 | 1 | 8.4e-08 | 4.1e-06 | 5.1e-06 | 2 | KREMEN1 |
239 | 22 | 30914473 | 32995751 | 6 | 1 | 1.2e-10 | 4.6e-10 | 1.6e-02 | 85 | SFI1 |
240 | 22 | 37781874 | 39355109 | 5 | 1 | 1.1e-13 | 3.4e-13 | 1.1e-04 | 72 | PLA2G6 |
241 | 22 | 39745241 | 42917154 | 21 | 6 | 3.0e-24 | 5.5e-25 | 1.0e+00 | 100 | ADSL MKL1 POLR3H TOB2 |
242 | 22 | 45199058 | 46691903 | 2 | 1 | 4.1e-09 | 1.2e-10 | 1.1e-03 | 74 | RIBC2 |
Trait | chisq ratio | # genes+ | # genes++ | % genes++ | corr | corr P | genes |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|---|---|---|---|
GTEx | Small Intestine Terminal Ileum | 29 | 6.3 | 7.2 |
GTEx | Ovary | 57 | 6.3 | 6.6 |
GTEx | Brain Frontal Cortex BA9 | 61 | 6.6 | 6.3 |
GTEx | Liver | 37 | 5.2 | 6.2 |
GTEx | Spleen | 72 | 5.1 | 6.2 |
GTEx | Brain Cortex | 57 | 5.5 | 6.1 |
GTEx | Cells EBV-transformed lymphocytes | 75 | 5.3 | 6.1 |
GTEx | Prostate | 44 | 5.3 | 6.1 |
GTEx | Uterus | 31 | 5.5 | 6.1 |
GTEx | Heart Left Ventricle | 74 | 4.8 | 6.0 |
GTEx | Stomach | 84 | 5.8 | 6.0 |
GTEx | Brain Putamen basal ganglia | 39 | 6.2 | 5.9 |
GTEx | Artery Coronary | 63 | 5.3 | 5.8 |
GTEx | Brain Cerebellar Hemisphere | 79 | 5.3 | 5.8 |
GTEx | Colon Sigmoid | 68 | 4.7 | 5.8 |
GTEx | Pancreas | 75 | 4.6 | 5.8 |
GTEx | Vagina | 33 | 5.2 | 5.8 |
GTEx | Adipose Visceral Omentum | 95 | 4.7 | 5.7 |
GTEx | Brain Caudate basal ganglia | 51 | 5.5 | 5.7 |
GTEx | Brain Cerebellum | 83 | 4.2 | 5.7 |
GTEx | Esophagus Gastroesophageal Junction | 72 | 5.0 | 5.7 |
GTEx | Heart Atrial Appendage | 78 | 4.9 | 5.7 |
GTEx | Pituitary | 50 | 4.5 | 5.7 |
GTEx | Artery Aorta | 127 | 4.3 | 5.6 |
GTEx | Brain Hippocampus | 31 | 5.9 | 5.6 |
GTEx | Brain Nucleus accumbens basal ganglia | 45 | 5.2 | 5.6 |
GTEx | Breast Mammary Tissue (Male) | 54 | 4.5 | 5.5 |
GTEx | Esophagus Muscularis | 145 | 4.5 | 5.5 |
GTEx | Testis | 140 | 4.4 | 5.5 |
ROSMAP | Brain Pre-frontal Cortex | 198 | 4.5 | 5.5 |
GTEx | Adipose Subcutaneous | 142 | 4.1 | 5.4 |
GTEx | Adrenal Gland | 70 | 4.8 | 5.4 |
GTEx | Artery Tibial | 142 | 3.8 | 5.4 |
GTEx | Breast Mammary Tissue | 77 | 3.9 | 5.4 |
GTEx | Lung | 129 | 4.5 | 5.4 |
GTEx | Muscle Skeletal | 134 | 4.6 | 5.4 |
GTEx | Skin Not Sun Exposed Suprapubic | 100 | 4.1 | 5.4 |
GTEx | Breast Mammary Tissue (Female) | 70 | 4.3 | 5.3 |
GTEx | Cells Transformed fibroblasts | 182 | 4.3 | 5.3 |
GTEx | Thyroid | 167 | 4.2 | 5.3 |
GTEx | Brain Hypothalamus | 25 | 4.2 | 5.2 |
GTEx | Skin Sun Exposed Lower leg | 137 | 3.8 | 5.2 |
GTEx | Whole Blood | 83 | 4.2 | 5.2 |
The Cancer Genome Atlas | Glioblastoma Multiforme | 46 | 4.5 | 5.2 |
GTEx | Colon Transverse | 79 | 3.8 | 5.1 |
GTEx | Esophagus Mucosa | 128 | 3.9 | 5.1 |
GTEx | Nerve Tibial | 167 | 3.9 | 5.1 |
The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | 45 | 4.1 | 5.0 |
The Cancer Genome Atlas | Esophageal Carcinoma | 26 | 3.8 | 5.0 |
The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | 42 | 3.8 | 5.0 |
The Cancer Genome Atlas | Colon Adenocarcinoma | 76 | 3.7 | 4.8 |
The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | 79 | 3.2 | 4.8 |
The Cancer Genome Atlas | Soft Tissue Sarcoma | 38 | 3.6 | 4.8 |
The Cancer Genome Atlas | Testicular Germ Cell Tumors | 38 | 3.0 | 4.8 |
The Cancer Genome Atlas | Bladder Urothelial Carcinoma | 58 | 3.5 | 4.7 |
The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | 67 | 3.3 | 4.7 |
The Cancer Genome Atlas | Lung Adenocarcinoma | 102 | 3.5 | 4.7 |
The Cancer Genome Atlas | Stomach Adenocarcinoma | 62 | 3.7 | 4.7 |
The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | 18 | 3.5 | 4.7 |
NTR | Blood | 83 | 3.5 | 4.6 |
CommonMind | Brain Pre-frontal Cortex | 157 | 2.9 | 4.6 |
The Cancer Genome Atlas | Breast Invasive Carcinoma | 137 | 3.1 | 4.6 |
The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | 94 | 3.5 | 4.6 |
The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | 130 | 3.2 | 4.6 |
The Cancer Genome Atlas | Brain Lower Grade Glioma | 133 | 3.1 | 4.6 |
The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | 53 | 3.3 | 4.6 |
The Cancer Genome Atlas | Pancreatic Adenocarcinoma | 58 | 3.5 | 4.6 |
The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | 46 | 3.5 | 4.6 |
The Cancer Genome Atlas | Prostate Adenocarcinoma | 151 | 3.3 | 4.6 |
The Cancer Genome Atlas | Rectum Adenocarcinoma | 20 | 2.9 | 4.5 |
The Cancer Genome Atlas | Thyroid Carcinoma | 153 | 3.0 | 4.5 |
METSIM | Adipose | 127 | 2.8 | 4.4 |
YFS | Blood | 114 | 2.5 | 4.3 |
The Cancer Genome Atlas | Skin Cutaneous Melanoma | 15 | 2.8 | 4.1 |