Best TWAS P=1.7e-08 · Best GWAS P=3.42e-09 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Colon Adenocarcinoma | STAB2 | 0.13 | 0.10 | lasso | 5 | 0.08 | 1.5e-05 | -5.9 | -5.6 | 1.7e-08 | 0.99 | 0.01 | 0.99 | FALSE |
| 2 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | STAB2 | 0.17 | 0.12 | lasso | 5 | 0.11 | 2.0e-12 | -5.9 | -5.6 | 1.7e-08 | 0.99 | 0.01 | 0.99 | TRUE |