Best TWAS P=2.57e-07 · Best GWAS P=2.81e-07 conditioned to 0.354
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | LBR | 0.12 | 0.04 | lasso | 3 | 0.02 | 1.8e-02 | 5.1 | 5.2 | 2.6e-07 | 0.93 | 0 | 0.98 | TRUE |
2 | GTEx | Artery Tibial | LBR | 0.49 | 0.40 | lasso | 6 | 0.40 | 3.4e-33 | 5.1 | 5.1 | 2.9e-07 | 0.99 | 0 | 1.00 | FALSE |
3 | GTEx | Nerve Tibial | LBR | 0.13 | 0.16 | lasso | 1 | 0.15 | 9.6e-11 | 5.1 | 5.1 | 2.8e-07 | 1.00 | 0 | 1.00 | FALSE |