Best TWAS P=1.75e-08 · Best GWAS P=2.21e-08 conditioned to 0.108
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Coronary | SLC35G2 | 0.16 | 0.03 | lasso | 8 | 0.05 | 0.0064 | -5.2 | 5.6 | 1.8e-08 | -0.84 | 0.07 | 0.69 | TRUE |
2 | GTEx | Thyroid | RP11-85F14.5 | 0.07 | 0.00 | lasso | 7 | 0.01 | 0.0473 | 3.6 | -5.4 | 6.8e-08 | 0.57 | 0.12 | 0.17 | FALSE |