TWAS
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About
Usage
Models
Genes
Traits
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Traits
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Impedance of leg (right)
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chr3:118,850,251-120,486,383
Best TWAS P=3.59e-08 · Best GWAS P=1.19e-09 conditioned to 0.000726
118.8M
119M
119.2M
119.4M
119.6M
119.8M
120M
120.2M
120.4M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Small Intestine Terminal Ileum
GSK3B
0.34
0.02
enet
41
0.19
5.9e-05
5.8
5.5
3.6e-08
0.63
0.04
0.77
TRUE
2
The Cancer Genome Atlas
Pancreatic Adenocarcinoma
NR1I2
0.11
0.01
blup
70
0.08
3.0e-04
3.4
-5.2
1.7e-07
-0.55
0.04
0.20
FALSE