Best TWAS P=1.09e-08 · Best GWAS P=1.38e-09 conditioned to 0.000225
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | EFNA5 | 0.17 | 0.04 | lasso | 9 | 0.07 | 6.0e-06 | 5.2 | -5.7 | 1.1e-08 | -0.05 | 0.05 | 0.95 | TRUE |
2 | GTEx | Lung | LINC01023 | 0.11 | 0.02 | enet | 16 | 0.01 | 9.3e-02 | -2.3 | -5.6 | 2.6e-08 | -0.44 | 0.08 | 0.28 | TRUE |