Best TWAS P=1.41e-09 · Best GWAS P=3.18e-09 conditioned to 0.191
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | NT5C3 | 0.17 | 0.07 | enet | 14 | 0.10 | 7.0e-11 | -5.9 | -6.1 | 1.4e-09 | 0.87 | 0.00 | 1.00 | TRUE |
| 2 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | NT5C3 | 0.09 | 0.07 | lasso | 5 | 0.08 | 3.1e-05 | -5.9 | -5.3 | 1.4e-07 | 0.93 | 0.01 | 0.98 | FALSE |