Best TWAS P=7.04e-10 · Best GWAS P=1.55e-10 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | TTC26 | 0.06 | 0.03 | lasso | 4 | 0.03 | 0.0001 | 6.4 | 6.2 | 7e-10 | 0.97 | 0.00 | 1.00 | TRUE |
2 | The Cancer Genome Atlas | Lung Adenocarcinoma | PARP12 | 0.02 | 0.01 | blup | 68 | 0.01 | 0.0237 | -4.6 | 5.5 | 4e-08 | -0.05 | 0.01 | 0.79 | TRUE |