Best TWAS P=3.21e-10 · Best GWAS P=1.14e-06 conditioned to 0.0754
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | PPIL2 | 0.03 | 0 | blup | 61 | 0.02 | 0.0044 | -4.1 | -6.3 | 3.2e-10 | 0.53 | 0.01 | 0.15 | TRUE |