Best TWAS P=7.12e-08 · Best GWAS P=1.5e-06 conditioned to 1.19e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Testis | CHD1 | 0.15 | 0.08 | lasso | 4 | 0.08 | 0.00014 | 3.9 | -5.2 | 1.9e-07 | 0.14 | 0.09 | 0.38 | FALSE |
| 2 | METSIM | Adipose | RGMB | 0.03 | 0.01 | blup | 341 | 0.02 | 0.00101 | 3.8 | -5.4 | 7.1e-08 | -0.01 | 0.06 | 0.69 | TRUE |