Best TWAS P=2.23e-09 · Best GWAS P=2.37e-13 conditioned to 2.23e-11
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | ROSMAP | Brain Pre-frontal Cortex | TAX1BP1 | 0.10 | 0.03 | bslmm | 515 | 0.07 | 8.3e-09 | -4.0 | 5.9 | 4.7e-09 | 0.11 | 0.98 | 0.01 | TRUE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | JAZF1 | 0.12 | 0.09 | lasso | 4 | 0.09 | 2.1e-09 | 5.8 | 6.0 | 2.2e-09 | 0.01 | 0.02 | 0.98 | TRUE |