TWAS
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Usage
Models
Genes
Traits
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Traits
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Impedance of arm (right)
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chr10:133,754,334-134,268,114
Best TWAS P=9.92e-09 · Best GWAS P=6.06e-08 conditioned to 0.36
133.8M
133.9M
134M
134.1M
134.2M
0
2
4
6
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Testicular Germ Cell Tumors
DPYSL4
0.17
0.12
blup
64
0.11
1.3e-04
4.9
-5.7
9.9e-09
0.86
0.01
0.98
TRUE
2
The Cancer Genome Atlas
Liver Hepatocellular Carcinoma
DPYSL4
0.13
0.11
enet
7
0.08
2.0e-04
-5.4
-5.5
3.5e-08
0.98
0.00
0.99
FALSE
1
The Cancer Genome Atlas
Cervical Squamous Cell Carcinoma
DPYSL4
0.31
0.19
lasso
10
0.18
3.4e-09
-5.4
-5.5
5.0e-08
0.93
0.00
1.00
FALSE