TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Impedance of arm (right)
:
←
→
chr11:26,818,083-28,416,646
Best TWAS P=9.67e-12 · Best GWAS P=4.47e-27 conditioned to 1.15e-07
26.8M
27M
27.2M
27.4M
27.6M
27.8M
28M
28.2M
28.4M
0
5
10
15
20
25
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
The Cancer Genome Atlas
Prostate Adenocarcinoma
BDNFOS
0.03
0.01
blup
83
0.02
0.00143
2.1
-6.8
9.7e-12
-0.76
0.02
0.94
TRUE
3
NTR
Blood
LIN7C
0.01
0.00
lasso
3
0.01
0.00218
-5.8
5.2
1.6e-07
0.17
0.52
0.01
TRUE
2
GTEx
Brain Putamen basal ganglia
BDNF-AS
0.22
0.17
lasso
4
0.13
0.00055
5.4
-5.8
5.4e-09
-0.65
0.04
0.82
FALSE
1
GTEx
Adipose Subcutaneous
LIN7C
0.08
0.06
lasso
1
0.04
0.00041
-5.7
-5.7
1.2e-08
-0.26
0.86
0.00
FALSE