TWAS
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Traits
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Traits
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Impedance of arm (right)
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chr12:46,077,695-47,465,082
Best TWAS P=2.2e-19 · Best GWAS P=1.44e-17 conditioned to 0.333
46M
46.2M
46.4M
46.6M
46.8M
47M
47.2M
47.4M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Kidney Renal Papillary Cell Carcinoma
SLC38A2
0.10
0.06
blup
30
0.05
0.00083
8.5
-9.0
2.2e-19
-0.90
0.01
0.92
TRUE
1
METSIM
Adipose
SLC38A2
0.02
0.02
blup
341
0.01
0.00581
7.7
-7.2
4.2e-13
-0.87
0.06
0.88
FALSE
3
The Cancer Genome Atlas
Soft Tissue Sarcoma
SLC38A2
0.06
0.01
blup
30
0.03
0.00513
8.5
-6.7
2.2e-11
-0.93
0.01
0.76
FALSE