Best TWAS P=1.07e-07 · Best GWAS P=1.6e-05 conditioned to 0.0511
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Skin Sun Exposed Lower leg | SNX29 | 0.22 | 0.04 | enet | 22 | 0.06 | 2.2e-05 | 3.5 | 5.3 | 1.2e-07 | 0.66 | 0.02 | 0.72 | FALSE |
| 2 | The Cancer Genome Atlas | Lung Adenocarcinoma | SNX29 | 0.10 | 0.02 | enet | 18 | 0.04 | 2.3e-05 | 3.1 | 5.3 | 1.1e-07 | 0.49 | 0.04 | 0.20 | TRUE |