TWAS
hub
About
Usage
Models
Genes
Traits
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Traits
:
Impedance of arm (right)
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chr17:28,952,286-30,343,146
Best TWAS P=6.94e-08 · Best GWAS P=2.22e-08 conditioned to 1
29M
29.2M
29.4M
29.6M
29.8M
30M
30.2M
30.4M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
5
The Cancer Genome Atlas
Prostate Adenocarcinoma
EVI2A
0.08
0.12
lasso
3
0.12
1.3e-12
-5.6
5.4
6.9e-08
-0.98
0.02
0.98
TRUE
3
The Cancer Genome Atlas
Breast Invasive Carcinoma
EVI2A
0.03
0.03
blup
38
0.03
6.9e-07
-5.1
5.3
1.4e-07
-0.96
0.02
0.98
FALSE
1
YFS
Blood
EVI2A
0.03
0.05
lasso
4
0.04
1.0e-13
-5.2
5.2
1.8e-07
-0.94
0.03
0.97
FALSE
2
The Cancer Genome Atlas
Bladder Urothelial Carcinoma
EVI2A
0.03
0.03
blup
37
0.03
2.3e-03
-5.2
5.2
2.0e-07
-0.98
0.02
0.80
FALSE
4
The Cancer Genome Atlas
Lung Adenocarcinoma
EVI2A
0.04
0.06
blup
38
0.06
3.0e-07
-5.1
5.1
2.9e-07
-0.96
0.03
0.97
FALSE