TWAS
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Genes
Traits
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Traits
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Impedance of arm (right)
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chr5:106,016,464-109,224,099
Best TWAS P=2.02e-16 · Best GWAS P=2.76e-18 conditioned to 0.201
106M
106.5M
107M
107.5M
108M
108.5M
109M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
5
GTEx
Lung
LINC01023
0.11
0.02
enet
16
0.01
9.3e-02
-4.13
-8.2
2.0e-16
-0.44
0.09
0.26
TRUE
4
GTEx
Artery Tibial
EFNA5
0.17
0.04
lasso
9
0.07
6.0e-06
6.25
-6.6
3.3e-11
-0.05
0.72
0.26
TRUE
1
CommonMind
Brain Pre-frontal Cortex
FER
0.10
0.01
enet
34
0.04
4.6e-06
-0.84
-6.4
1.6e-10
-0.20
0.21
0.31
TRUE
3
GTEx
Artery Tibial
FER
0.14
0.06
enet
7
0.05
7.3e-05
-3.89
5.6
1.7e-08
0.68
0.24
0.74
TRUE
2
GTEx
Artery Coronary
FER
0.34
0.10
lasso
8
0.12
5.4e-05
-3.89
5.2
2.0e-07
0.59
0.17
0.26
FALSE