TWAS
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Traits
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Traits
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Impedance of arm (left)
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chr9:102,374,475-103,803,109
Best TWAS P=1.25e-07 · Best GWAS P=2.01e-07 conditioned to 0.267
102.4M
102.6M
102.8M
103M
103.2M
103.4M
103.6M
103.8M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Cervical Squamous Cell Carcinoma
INVS
0.10
0.03
blup
107
0.07
4e-04
-4.9
-5.3
1.2e-07
0.89
0.02
0.94
TRUE
1
GTEx
Skin Sun Exposed Lower leg
TEX10
0.27
0.27
lasso
8
0.28
7e-23
-5.2
-5.1
2.8e-07
1.00
0.01
0.99
FALSE