4891 significantly associated models · 1008 unique genes
.
# | chr | p0 | p1 | # assoc genes | # joint genes | best TWAS P | best SNP P | cond SNP P | % var exp | joint genes |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1 | 752566 | 2573199 | 8 | 2 | 3.6e-13 | 2.3e-13 | 2.3e-01 | 97 | RP1-283E3.4 RP5-890O3.9 |
2 | 1 | 8655495 | 11856378 | 5 | 3 | 2.7e-17 | 6.3e-16 | 1.0e+00 | 100 | EXOSC10 KIF1B SPSB1 |
3 | 1 | 16142960 | 18074702 | 12 | 1 | 2.7e-10 | 6.4e-09 | 4.8e-02 | 88 | CROCC |
4 | 1 | 31402148 | 34592020 | 6 | 4 | 1.9e-14 | 6.2e-15 | 1.0e+00 | 100 | PEF1 PHC2 S100PBP TMEM54 |
5 | 1 | 37326083 | 38723544 | 1 | 1 | 1.3e-07 | 2.3e-06 | 6.1e-02 | 84 | DNALI1 |
6 | 1 | 40799427 | 42406344 | 1 | 1 | 6.7e-09 | 2.7e-10 | 5.5e-04 | 70 | SCMH1 |
7 | 1 | 71163715 | 73435171 | 1 | 1 | 1.1e-07 | 2.3e-16 | 3.6e-10 | 42 | NEGR1 |
8 | 1 | 77655651 | 79300939 | 3 | 1 | 3.6e-09 | 1.8e-08 | 6.0e-02 | 89 | GIPC2 |
9 | 1 | 92733966 | 93502451 | 1 | 1 | 1.7e-07 | 4.4e-08 | 7.5e-02 | 89 | EVI5 |
10 | 1 | 96492298 | 97979726 | 1 | 1 | 1.1e-07 | 8.1e-10 | 8.3e-04 | 70 | PTBP2 |
11 | 1 | 109154974 | 110742615 | 7 | 1 | 8.2e-10 | 1.5e-09 | 1.0e+00 | 100 | ATXN7L2 |
12 | 1 | 119185080 | 119781299 | 1 | 1 | 1.2e-08 | 5.6e-13 | 3.0e-06 | 58 | TBX15 |
13 | 1 | 149672809 | 152126467 | 28 | 11 | 1.5e-50 | 2.0e-71 | NaN | NaN | ARNT GABPB2 GOLPH3L MCL1 MTMR11 POGZ RP11-196G18.22 RPRD2 SELENBP1 SV2A |
14 | 1 | 153493615 | 155910830 | 8 | 4 | 2.0e-22 | 2.9e-24 | 1.3e-01 | 98 | AQP10 GBA MUC1 ZBTB7B |
15 | 1 | 159559531 | 161006019 | 2 | 1 | 5.5e-10 | 7.2e-10 | 5.2e-02 | 90 | NCSTN |
16 | 1 | 172881827 | 175663031 | 8 | 1 | 1.2e-10 | 8.7e-11 | 1.0e+00 | 100 | SERPINC1 |
17 | 1 | 177282200 | 180018254 | 3 | 2 | 2.5e-08 | 1.6e-26 | 6.8e-23 | 14 | RP11-568K15.1 SOAT1 |
18 | 1 | 201158976 | 202607593 | 3 | 1 | 9.7e-17 | 2.4e-17 | 1.0e+00 | 100 | LMOD1 |
19 | 1 | 211765485 | 213229337 | 1 | 1 | 1.8e-07 | 2.2e-09 | 1.0e+00 | 100 | PPP2R5A |
20 | 1 | 218648556 | 220082150 | 1 | 1 | 4.7e-24 | 3.0e-33 | 7.4e-11 | 71 | LYPLAL1 |
21 | 1 | 220359347 | 221753645 | 1 | 1 | 1.7e-13 | 6.4e-18 | 2.3e-07 | 64 | HLX |
22 | 1 | 224894095 | 226313525 | 2 | 1 | 1.6e-08 | 4.1e-08 | 3.0e-05 | 42 | LBR |
23 | 1 | 226842299 | 227422862 | 1 | 1 | 5.7e-08 | 4.7e-08 | 2.6e-03 | 70 | CABC1 |
24 | 2 | 15703 | 1384725 | 5 | 3 | 2.8e-15 | 5.0e-36 | 5.0e-21 | 44 | SH3YL1 TMEM18 |
25 | 2 | 24688055 | 26088769 | 1 | 1 | 5.0e-08 | 7.8e-14 | 7.8e-13 | 8 | POMC |
26 | 2 | 26883355 | 29344127 | 12 | 5 | 2.2e-31 | 7.7e-28 | 1.0e+00 | 100 | BRE FNDC4 RP11-373D23.3 SUPT7L |
27 | 2 | 41976511 | 43413114 | 1 | 1 | 6.1e-08 | 2.9e-08 | 3.8e-05 | 45 | KCNG3 |
28 | 2 | 55401562 | 56843605 | 1 | 2 | 2.1e-11 | 3.3e-20 | 8.1e-04 | 87 | EFEMP1 |
29 | 2 | 68850921 | 70310878 | 1 | 1 | 4.0e-08 | 3.2e-11 | 1.4e-08 | 27 | GFPT1 |
30 | 2 | 85115111 | 86513102 | 1 | 1 | 2.4e-07 | 2.5e-06 | 1.0e-01 | 88 | VAMP5 |
31 | 2 | 97595991 | 98975985 | 1 | 1 | 3.2e-08 | 3.1e-08 | 5.4e-02 | 88 | ACTR1B |
32 | 2 | 101191950 | 102574720 | 1 | 1 | 1.2e-07 | 5.0e-06 | 1.3e-01 | 89 | SNORD89 |
33 | 2 | 151570279 | 153056846 | 2 | 1 | 3.1e-12 | 1.3e-12 | 2.7e-02 | 90 | RIF1 |
34 | 2 | 160879651 | 161592249 | 1 | 1 | 1.1e-07 | 5.5e-08 | 1.8e-01 | 94 | RBMS1 |
35 | 2 | 164657815 | 166170073 | 1 | 1 | 7.9e-13 | 1.1e-16 | 1.6e-08 | 54 | GRB14 |
36 | 2 | 171683107 | 173114238 | 1 | 1 | 2.3e-12 | 1.2e-13 | 6.3e-03 | 86 | CYBRD1 |
37 | 2 | 175348838 | 177746117 | 6 | 3 | 8.3e-17 | 1.0e-15 | 2.4e-02 | 92 | ATP5G3 HOXD11 HOXD-AS1 |
38 | 2 | 182305254 | 184341553 | 2 | 1 | 1.5e-09 | 8.3e-13 | 1.1e-05 | 62 | PDE1A |
39 | 2 | 189611749 | 191029604 | 2 | 1 | 3.2e-09 | 2.7e-10 | 7.9e-03 | 82 | COL5A2 |
40 | 2 | 197134790 | 200117777 | 7 | 1 | 1.9e-33 | 2.3e-33 | 1.0e+00 | 100 | RFTN2 |
41 | 2 | 202200575 | 203894227 | 3 | 1 | 7.6e-10 | 4.8e-10 | 1.0e+00 | 100 | FZD7 |
42 | 2 | 205851076 | 207874372 | 7 | 1 | 6.3e-16 | 2.1e-16 | 3.2e-02 | 93 | NDUFS1 |
43 | 2 | 217908472 | 221058583 | 5 | 4 | 1.1e-15 | 2.0e-16 | 1.0e+00 | 100 | DIRC3 FAM134A RP11-316O14.1 RQCD1 |
44 | 2 | 225574650 | 227217161 | 1 | 1 | 6.5e-21 | 7.7e-41 | 4.1e-23 | 45 | NYAP2 |
45 | 2 | 240826197 | 242953866 | 4 | 3 | 3.8e-13 | 1.4e-12 | 1.0e+00 | 100 | CAPN10-AS1 HDLBP PASK |
46 | 3 | 10483958 | 13169322 | 5 | 3 | 1.3e-09 | 1.2e-15 | 2.7e-07 | 59 | ATG7 HRH1 PPARG |
47 | 3 | 13456382 | 14865367 | 1 | 1 | 1.5e-10 | 6.5e-10 | 2.0e-08 | 18 | CHCHD4 |
48 | 3 | 37692342 | 39280382 | 5 | 1 | 1.6e-30 | 2.7e-30 | 1.0e+00 | 100 | EXOG |
49 | 3 | 41948665 | 43544836 | 4 | 1 | 2.1e-14 | 2.0e-14 | 8.3e-02 | 95 | HHATL |
50 | 3 | 46016464 | 47425473 | 1 | 1 | 1.1e-08 | 8.6e-11 | 1.8e-03 | 77 | ALS2CL |
51 | 3 | 48012797 | 53860103 | 76 | 8 | 5.9e-33 | 1.0e-26 | NaN | NaN | ARIH2 GPX1 HEMK1 NEK4 RASSF1 RBM6 TEX264 |
52 | 3 | 84317575 | 86808226 | 1 | 1 | 1.1e-24 | 2.3e-22 | 1.0e+00 | 100 | CADM2 |
53 | 3 | 97816039 | 99315838 | 1 | 1 | 1.5e-07 | 8.1e-08 | 1.0e+00 | 100 | DCBLD2 |
54 | 3 | 127175889 | 128821807 | 1 | 1 | 2.7e-08 | 5.7e-06 | 5.1e-01 | 98 | EEFSEC |
55 | 3 | 133088362 | 134666475 | 1 | 1 | 7.0e-11 | 2.0e-11 | 2.0e-05 | 60 | RYK |
56 | 3 | 134986214 | 137368142 | 8 | 1 | 1.9e-18 | 3.0e-18 | 2.5e-03 | 88 | SLC35G2 |
57 | 3 | 183204923 | 184700426 | 4 | 2 | 6.1e-12 | 2.4e-13 | 6.3e-03 | 86 | PSMD2 VWA5B2 |
58 | 3 | 185520342 | 186072370 | 1 | 1 | 2.4e-15 | 3.3e-17 | 7.5e-04 | 84 | ETV5 |
59 | 4 | 352955 | 1894092 | 3 | 1 | 2.0e-09 | 1.5e-09 | 7.7e-02 | 91 | RNF212 |
60 | 4 | 24422187 | 26118755 | 4 | 1 | 2.4e-17 | 1.3e-16 | 1.0e+00 | 100 | ANAPC4 |
61 | 4 | 57080198 | 58593295 | 4 | 1 | 1.7e-13 | 2.1e-11 | 1.0e-01 | 94 | POLR2B |
62 | 4 | 82578407 | 83991529 | 1 | 1 | 6.3e-09 | 1.1e-11 | 3.4e-04 | 72 | HNRNPD |
63 | 4 | 86236934 | 88430396 | 2 | 1 | 7.0e-12 | 1.0e-08 | 7.0e-03 | 78 | PTPN13 |
64 | 4 | 102852939 | 104815937 | 8 | 1 | 2.0e-14 | 2.2e-12 | 4.5e-02 | 92 | CENPE |
65 | 4 | 119408351 | 121242474 | 8 | 1 | 4.3e-11 | 8.3e-11 | 3.6e-02 | 90 | PDE5A |
66 | 4 | 156149811 | 157568422 | 1 | 1 | 1.1e-07 | 5.9e-08 | 2.4e-06 | 24 | CTSO |
67 | 4 | 158997448 | 160525502 | 1 | 1 | 1.0e-08 | 3.2e-09 | 1.2e-01 | 93 | FNIP2 |
68 | 4 | 174515682 | 175953212 | 1 | 1 | 1.7e-07 | 1.3e-07 | 1.0e+00 | 100 | CEP44 |
69 | 5 | 41726855 | 43577190 | 3 | 2 | 4.5e-09 | 1.0e-10 | 9.1e-03 | 84 | CCDC152 GHR |
70 | 5 | 52612806 | 53223752 | 1 | 1 | 2.1e-12 | 3.9e-28 | 1.7e-18 | 36 | NDUFS4 |
71 | 5 | 55509554 | 56917974 | 2 | 1 | 1.4e-07 | 9.4e-27 | 6.5e-26 | 3 | MAP3K1 |
72 | 5 | 62764129 | 65866903 | 4 | 2 | 3.9e-12 | 3.8e-17 | 2.9e-11 | 38 | RNF180 SGTB |
73 | 5 | 73626450 | 75704085 | 6 | 1 | 1.3e-15 | 5.5e-17 | 6.5e-03 | 89 | POC5 |
74 | 5 | 78619399 | 80012251 | 2 | 1 | 6.7e-09 | 3.8e-08 | 1.5e-01 | 93 | RP11-168A11.4 |
75 | 5 | 87006055 | 88875673 | 2 | 2 | 9.5e-14 | 7.6e-16 | 3.7e-13 | 19 | CTC-498M16.2 MEF2C |
76 | 5 | 106016464 | 109224099 | 3 | 4 | 2.3e-17 | 6.5e-19 | 2.7e-01 | 98 | EFNA5 FER LINC01023 |
77 | 5 | 122434666 | 123002130 | 1 | 1 | 8.2e-08 | 5.8e-11 | 1.7e-04 | 67 | CEP120 |
78 | 5 | 126897060 | 128694216 | 1 | 1 | 2.3e-11 | 6.9e-10 | 6.0e-01 | 99 | FBN2 |
79 | 5 | 133164490 | 134612693 | 1 | 1 | 2.3e-09 | 2.8e-12 | 6.2e-11 | 12 | PHF15 |
80 | 5 | 136723696 | 138110702 | 1 | 1 | 5.8e-08 | 6.6e-10 | 1.4e-03 | 73 | WNT8A |
81 | 5 | 140011315 | 141590358 | 1 | 1 | 3.1e-07 | 1.8e-09 | 2.0e-06 | 38 | PCDHGA1 |
82 | 5 | 176040488 | 177260129 | 2 | 1 | 1.9e-08 | 6.1e-12 | 1.2e-07 | 41 | MXD3 |
83 | 5 | 177789202 | 179203479 | 1 | 1 | 4.9e-11 | 2.6e-11 | 1.6e-01 | 96 | ZNF354C |
84 | 6 | 33551514 | 36158878 | 7 | 3 | 2.5e-20 | 1.8e-20 | 2.8e-04 | 85 | RPS10 SNRPC TEAD3 |
85 | 6 | 44079216 | 46043561 | 1 | 1 | 2.3e-07 | 1.9e-07 | 1.0e+00 | 100 | SUPT3H |
86 | 6 | 100257579 | 102026932 | 2 | 1 | 1.5e-09 | 1.9e-10 | 3.3e-02 | 89 | ASCC3 |
87 | 6 | 104478130 | 106283787 | 3 | 1 | 1.2e-18 | 4.5e-29 | 3.8e-12 | 62 | LIN28B |
88 | 6 | 108183628 | 109704062 | 1 | 1 | 2.7e-09 | 9.1e-16 | 1.2e-08 | 50 | FOXO3 |
89 | 6 | 115569351 | 117288499 | 3 | 1 | 3.9e-10 | 1.1e-08 | 2.0e-02 | 83 | FRK |
90 | 6 | 125370626 | 128359362 | 4 | 4 | 4.4e-09 | 2.3e-09 | 6.5e-01 | 99 | CENPW ECHDC1 HEY2 HINT3 |
91 | 6 | 129638583 | 131163098 | 2 | 1 | 3.2e-18 | 9.1e-17 | 6.6e-01 | 100 | L3MBTL3 |
92 | 6 | 141924760 | 143456607 | 1 | 1 | 2.6e-09 | 2.3e-08 | 1.3e-02 | 80 | GPR126 |
93 | 7 | 1787236 | 3581391 | 2 | 1 | 8.1e-09 | 3.6e-08 | 3.5e-04 | 58 | AC004840.9 |
94 | 7 | 5674709 | 7191181 | 3 | 1 | 1.7e-08 | 1.2e-08 | 1.0e+00 | 100 | DAGLB |
95 | 7 | 27082425 | 28568019 | 2 | 3 | 1.2e-11 | 5.1e-13 | 2.7e-07 | 49 | JAZF1 TAX1BP1 |
96 | 7 | 34276627 | 35772982 | 1 | 1 | 3.6e-09 | 1.7e-09 | 2.8e-02 | 87 | DPY19L1 |
97 | 7 | 38513924 | 39195671 | 1 | 1 | 6.6e-10 | 2.3e-17 | 8.8e-14 | 22 | VPS41 |
98 | 7 | 39409632 | 39894883 | 1 | 1 | 2.2e-07 | 3.8e-08 | 1.1e-04 | 51 | LOC646999 |
99 | 7 | 43282331 | 44683889 | 1 | 1 | 1.9e-08 | 4.7e-06 | 5.0e-02 | 82 | POLR2J4 |
100 | 7 | 71652312 | 75842792 | 15 | 16 | 3.0e-20 | 5.8e-20 | 1.0e+00 | 100 | BCL7B FZD9 MLXIPL PMS2L3 PMS2P2 PMS2P3 POM121 STAG3L1 STAG3L2 TRIM73 |
101 | 7 | 75913086 | 77744459 | 4 | 3 | 2.5e-12 | 5.1e-11 | NaN | NaN | DTX2P1-UPK3BP1-PMS2P11 GSAP |
102 | 7 | 89097580 | 90699073 | 2 | 1 | 1.7e-09 | 2.8e-09 | 1.1e-01 | 93 | STEAP2 |
103 | 7 | 98774738 | 101482413 | 8 | 2 | 2.2e-09 | 7.0e-09 | 4.5e-01 | 98 | TRIM4 VGF |
104 | 7 | 101626640 | 103015677 | 1 | 1 | 5.3e-08 | 5.2e-06 | 8.9e-03 | 67 | RASA4DP |
105 | 7 | 133730639 | 135343455 | 1 | 1 | 1.0e-08 | 4.5e-09 | 9.6e-02 | 92 | CALD1 |
106 | 8 | 8092025 | 13120332 | 38 | 11 | 4.0e-21 | 1.4e-19 | NaN | NaN | AF131215.9 FAM66D FAM85A FDFT1 MSRA NEIL2 PINX1 |
107 | 8 | 32522626 | 34052327 | 3 | 1 | 1.5e-09 | 8.2e-09 | 4.9e-03 | 76 | FUT10 |
108 | 8 | 37329315 | 39431138 | 2 | 2 | 2.9e-08 | 3.7e-08 | 6.9e-02 | 89 | RP11-90P5.2 TM2D2 |
109 | 8 | 56269387 | 57683880 | 2 | 1 | 1.0e-08 | 1.9e-08 | 1.6e-01 | 94 | RPS20 |
110 | 8 | 58628032 | 60190231 | 2 | 1 | 1.1e-09 | 7.5e-10 | 4.1e-02 | 89 | SDCBP |
111 | 8 | 88801153 | 89582625 | 1 | 1 | 1.3e-12 | 1.9e-15 | 2.7e-04 | 79 | MMP16 |
112 | 8 | 94690786 | 96276292 | 3 | 1 | 1.3e-16 | 3.1e-14 | 2.3e-01 | 98 | KIAA1429 |
113 | 8 | 98182843 | 99748557 | 1 | 1 | 1.8e-07 | 1.0e-13 | 7.9e-09 | 40 | MATN2 |
114 | 8 | 143652160 | 146293414 | 5 | 2 | 3.6e-10 | 1.1e-11 | 8.5e-02 | 94 | GLI4 GS1-393G12.12 |
115 | 9 | 12410173 | 13977570 | 1 | 1 | 4.2e-08 | 3.3e-09 | 2.4e-02 | 85 | MPDZ |
116 | 9 | 33414173 | 34824830 | 1 | 1 | 1.8e-07 | 4.2e-05 | 6.1e-01 | 98 | DCAF12 |
117 | 9 | 76864766 | 78266575 | 1 | 1 | 5.8e-09 | 8.1e-07 | 4.2e-02 | 83 | C9orf40 |
118 | 9 | 85579528 | 87315117 | 4 | 2 | 1.7e-18 | 7.0e-17 | 7.2e-01 | 100 | RMI1 UBQLN1 |
119 | 9 | 93630445 | 97136378 | 12 | 2 | 2.4e-23 | 2.0e-23 | 1.0e+00 | 100 | NOL8 PHF2 |
120 | 9 | 102374475 | 103803109 | 2 | 1 | 1.2e-07 | 2.0e-07 | 2.7e-01 | 95 | INVS |
121 | 9 | 111457987 | 112022255 | 1 | 1 | 2.0e-09 | 7.8e-06 | 3.1e-01 | 95 | CTNNAL1 |
122 | 9 | 116404085 | 117853103 | 1 | 1 | 8.3e-08 | 8.2e-08 | 3.9e-02 | 85 | AKNA |
123 | 9 | 126321003 | 127872298 | 3 | 1 | 4.4e-16 | 3.5e-17 | 1.0e+00 | 100 | PSMB7 |
124 | 9 | 128980174 | 130673419 | 1 | 1 | 5.5e-11 | 4.3e-11 | 1.7e-02 | 87 | RALGPS1 |
125 | 9 | 133571587 | 135074103 | 2 | 1 | 3.0e-08 | 5.1e-12 | 4.2e-07 | 46 | PRRC2B |
126 | 9 | 135883620 | 136399075 | 1 | 1 | 1.5e-20 | 6.6e-18 | 4.2e-01 | 99 | ABO |
127 | 9 | 138403706 | 139836362 | 1 | 1 | 5.2e-10 | 3.3e-10 | 1.5e-03 | 74 | QSOX2 |
128 | 10 | 22131659 | 23698033 | 1 | 1 | 1.7e-07 | 1.7e-07 | 1.0e+00 | 100 | PIP4K2A |
129 | 10 | 64195778 | 65911294 | 5 | 1 | 2.4e-17 | 8.6e-17 | 7.9e-02 | 96 | NRBF2 |
130 | 10 | 71736472 | 73217461 | 1 | 1 | 1.1e-15 | 1.3e-19 | 2.1e-05 | 78 | ADAMTS14 |
131 | 10 | 76465803 | 79018276 | 2 | 1 | 1.2e-19 | 4.3e-20 | 4.0e-03 | 90 | C10orf11 |
132 | 10 | 95019584 | 97524313 | 6 | 9 | 2.6e-14 | 1.6e-24 | NaN | NaN | CYP2C8 HELLS NOC3L PLCE1 TBC1D12 |
133 | 10 | 99204526 | 100718107 | 2 | 1 | 1.4e-13 | 1.4e-14 | 7.7e-05 | 74 | LOXL4 |
134 | 10 | 101975269 | 103362569 | 2 | 1 | 3.1e-11 | 4.4e-12 | 1.3e-11 | 4 | RP11-179B2.2 |
135 | 10 | 103550604 | 106371784 | 4 | 3 | 8.6e-13 | 2.5e-11 | 6.8e-04 | 74 | ACTR1A OBFC1 TRIM8 |
136 | 11 | 198510 | 1523347 | 8 | 2 | 6.5e-10 | 3.8e-09 | 3.9e-03 | 76 | CHID1 PSMD13 |
137 | 11 | 1625363 | 2161858 | 1 | 1 | 1.3e-07 | 2.1e-07 | 1.9e-03 | 64 | LSP1 |
138 | 11 | 5954735 | 7371849 | 2 | 1 | 1.4e-08 | 5.8e-11 | 1.2e-04 | 66 | DCHS1 |
139 | 11 | 8920704 | 11227175 | 5 | 2 | 4.1e-15 | 3.7e-17 | 3.1e-03 | 88 | ADM AMPD3 |
140 | 11 | 16343081 | 18106069 | 7 | 7 | 7.2e-11 | 1.9e-09 | NaN | NaN | ABCC8 DKFZp686O24166 KCNJ11 OR7E14P RP1-239B22.5 |
141 | 11 | 26818083 | 28416646 | 3 | 3 | 1.9e-13 | 1.7e-30 | 9.9e-07 | 82 | BDNF-AS BDNFOS LIN7C |
142 | 11 | 29646947 | 32502380 | 4 | 2 | 2.3e-12 | 2.2e-12 | 1.0e+00 | 100 | ARL14EP ELP4 |
143 | 11 | 42881882 | 44577468 | 1 | 1 | 5.9e-08 | 7.6e-07 | 1.0e+00 | 100 | HSD17B12 |
144 | 11 | 61627881 | 63284510 | 11 | 1 | 7.6e-14 | 1.4e-13 | 1.0e+00 | 100 | INTS5 |
145 | 11 | 64501991 | 66690454 | 18 | 6 | 1.0e-20 | 5.5e-18 | NaN | NaN | CTSW EFEMP2 FIBP NEAT1 PACS1 SNX32 |
146 | 11 | 67533195 | 70179848 | 4 | 2 | 2.0e-10 | 9.5e-12 | 1.3e-01 | 95 | ORAOV1 SAPS3 |
147 | 11 | 76898338 | 78979645 | 8 | 1 | 2.2e-16 | 7.5e-17 | 1.0e+00 | 100 | GAB2 |
148 | 11 | 85456242 | 87349407 | 2 | 1 | 1.8e-09 | 7.2e-09 | 4.1e-02 | 88 | PRSS23 |
149 | 11 | 118341649 | 119751585 | 1 | 1 | 1.4e-07 | 9.5e-07 | 9.4e-01 | 100 | NLRX1 |
150 | 12 | 191619 | 1711109 | 1 | 1 | 1.1e-09 | 7.3e-11 | 2.8e-06 | 48 | WNK1 |
151 | 12 | 14337924 | 15812575 | 3 | 1 | 2.1e-08 | 1.1e-07 | 5.5e-01 | 99 | ERP27 |
152 | 12 | 41935609 | 43679700 | 3 | 1 | 2.4e-09 | 6.3e-08 | 5.6e-02 | 88 | PPHLN1 |
153 | 12 | 46077695 | 47465082 | 1 | 1 | 3.0e-20 | 4.4e-19 | 5.2e-02 | 95 | SLC38A2 |
154 | 12 | 47671905 | 49444545 | 5 | 1 | 1.1e-15 | 1.8e-16 | 9.9e-04 | 84 | RP1-228P16.1 |
155 | 12 | 49780778 | 51912062 | 6 | 2 | 1.7e-10 | 6.7e-10 | 2.2e-07 | 30 | CERS5 DIP2B |
156 | 12 | 53926889 | 55370164 | 7 | 3 | 6.6e-18 | 1.9e-13 | 5.9e-02 | 93 | CBX5 HOXC5 LOC400043 |
157 | 12 | 55601472 | 59016962 | 19 | 3 | 1.1e-18 | 1.5e-14 | 3.9e-03 | 86 | METTL21B PRIM1 RPS26 |
158 | 13 | 50592874 | 52109040 | 1 | 1 | 5.9e-09 | 7.0e-15 | 1.1e-08 | 46 | DLEU7 |
159 | 13 | 75401406 | 76905589 | 3 | 1 | 3.1e-12 | 4.8e-12 | 1.0e+00 | 100 | RP11-173B14.4 |
160 | 13 | 95632770 | 97132111 | 1 | 1 | 6.9e-08 | 7.3e-10 | 2.8e-03 | 76 | DNAJC3 |
161 | 14 | 22600863 | 23996772 | 1 | 1 | 5.9e-11 | 9.7e-13 | 4.8e-04 | 76 | MRPL52 |
162 | 14 | 34696729 | 36483802 | 5 | 1 | 3.0e-11 | 8.6e-12 | 3.3e-04 | 72 | FAM177A1 |
163 | 14 | 55273730 | 56741515 | 1 | 1 | 1.8e-09 | 1.9e-12 | 1.3e-04 | 70 | KTN1-AS1 |
164 | 14 | 72695406 | 74627634 | 4 | 1 | 3.0e-12 | 1.8e-11 | 1.0e-03 | 76 | DCAF4 |
165 | 14 | 79965456 | 81549533 | 1 | 1 | 1.6e-09 | 1.6e-11 | 2.3e-03 | 80 | DIO2 |
166 | 14 | 90643934 | 94495324 | 5 | 5 | 8.5e-12 | 7.7e-12 | 4.0e-05 | 64 | BTBD7 RIN3 RPS6KA5 TRIP11 |
167 | 14 | 101850676 | 103494612 | 5 | 2 | 3.3e-12 | 7.4e-14 | 2.9e-02 | 92 | WDR20 ZNF839 |
168 | 15 | 30930500 | 31932865 | 1 | 1 | 7.3e-09 | 2.4e-08 | 1.0e+00 | 100 | FAN1 |
169 | 15 | 44959112 | 46410543 | 3 | 1 | 1.9e-09 | 2.3e-09 | 3.0e-01 | 97 | GATM |
170 | 15 | 61987998 | 63831984 | 1 | 1 | 5.6e-10 | 3.7e-10 | 2.0e-01 | 96 | TLN2 |
171 | 15 | 65888692 | 69178312 | 5 | 4 | 2.3e-14 | 6.3e-14 | 1.0e+00 | 100 | DIS3L LBXCOR1 PIAS1 SMAD3 |
172 | 15 | 73524629 | 75159433 | 6 | 2 | 1.7e-14 | 1.1e-18 | 7.8e-05 | 80 | ISLR LOXL1-AS1 |
173 | 15 | 76398193 | 78806023 | 8 | 1 | 5.0e-19 | 3.3e-17 | 5.0e-02 | 95 | TSPAN3 |
174 | 15 | 83632164 | 85895721 | 13 | 11 | 2.0e-35 | 2.0e-51 | NaN | NaN | AC103965.1 ADAMTSL3 CSPG4P11 LOC388152 RN7SL417P RP11-182J1.14 RP11-182J1.16 |
175 | 15 | 89192873 | 89701439 | 1 | 1 | 2.4e-07 | 6.8e-33 | 2.7e-27 | 18 | MFGE8 |
176 | 15 | 99816860 | 101559136 | 2 | 2 | 9.3e-16 | 5.1e-12 | 7.8e-02 | 94 | ADAMTS17 CTD-3076O17.1 |
177 | 16 | 711905 | 2952423 | 8 | 2 | 2.0e-10 | 6.5e-11 | 8.5e-03 | 84 | LA16c-316G12.2 MLST8 |
178 | 16 | 11373301 | 13364255 | 1 | 1 | 3.9e-08 | 2.6e-05 | 3.0e-04 | 26 | SNX29 |
179 | 16 | 19016966 | 20596558 | 7 | 1 | 5.6e-19 | 2.6e-17 | 1.0e+00 | 100 | GPRC5B |
180 | 16 | 24301701 | 24829178 | 1 | 1 | 7.9e-11 | 1.9e-15 | 9.8e-07 | 62 | RBBP6 |
181 | 16 | 28825605 | 32137965 | 49 | 17 | 6.8e-27 | 5.2e-21 | NaN | NaN | ALDOA BCKDK FUS GDPD3 INO80E ITGAX MYST1 PPP4C RP11-231C14.4 TBX6 ZNF646 ZNF720 |
182 | 16 | 49403920 | 50792268 | 2 | 1 | 3.8e-08 | 4.7e-08 | 3.9e-03 | 72 | HEATR3 |
183 | 16 | 52828325 | 54846383 | 2 | 3 | 2.7e-23 | 8.2e-100 | 1.1e-52 | 48 | AKTIP FTO |
184 | 16 | 67872251 | 68639338 | 2 | 1 | 4.4e-08 | 5.1e-08 | 6.8e-05 | 46 | PRMT7 |
185 | 16 | 75019070 | 75539885 | 1 | 1 | 4.0e-08 | 8.6e-10 | 5.6e-03 | 80 | BCAR1 |
186 | 16 | 89287857 | 90172696 | 1 | 1 | 2.3e-07 | 4.5e-06 | 1.9e-01 | 92 | AC092143.1 |
187 | 17 | 1588930 | 3000009 | 3 | 2 | 5.2e-11 | 2.1e-09 | 1.7e-11 | -26 | PAFAH1B1 SMG6 |
188 | 17 | 6652789 | 8515636 | 10 | 1 | 6.9e-17 | 3.4e-14 | 1.9e-01 | 97 | TNFSF12 |
189 | 17 | 20514921 | 22010013 | 2 | 1 | 3.9e-11 | 8.8e-11 | 5.0e-02 | 91 | KCNJ12 |
190 | 17 | 26888725 | 28320473 | 1 | 1 | 8.4e-09 | 2.2e-07 | 3.9e-02 | 84 | NUFIP2 |
191 | 17 | 29398369 | 29897264 | 1 | 1 | 2.4e-07 | 1.1e-07 | 1.0e+00 | 100 | EVI2A |
192 | 17 | 37483599 | 38916313 | 1 | 1 | 1.8e-07 | 8.8e-07 | 7.4e-01 | 100 | MED24 |
193 | 17 | 42138392 | 48000146 | 47 | 22 | 3.4e-19 | 1.1e-21 | NaN | NaN | ARL17B CALCOCO2 COPZ2 DCAKD HOXB-AS1 LOC644172 LRRC37A LRRC37A2 LRRC46 NFE2L1 OSBPL7 PHOSPHO1 PRR15L RP5-890E16.2 SCRN2 TTLL6 ZNF652 |
194 | 17 | 61106371 | 62694738 | 6 | 1 | 2.4e-09 | 3.6e-09 | 5.8e-03 | 78 | TCAM1P |
195 | 17 | 77072043 | 81051007 | 4 | 3 | 1.1e-12 | 8.9e-12 | 3.2e-05 | 63 | BAIAP2 CBX8 WDR45B |
196 | 18 | 2912920 | 4304557 | 1 | 1 | 8.6e-09 | 6.1e-09 | 1.0e+00 | 100 | DLGAP1-AS2 |
197 | 18 | 57349900 | 58729694 | 1 | 1 | 9.3e-20 | 7.7e-69 | 2.9e-51 | 26 | MC4R |
198 | 19 | 1127720 | 2542673 | 1 | 1 | 6.8e-10 | 2.8e-07 | 4.2e-07 | 3 | REXO1 |
199 | 19 | 3268722 | 5153606 | 4 | 1 | 7.0e-11 | 3.0e-10 | 1.0e+00 | 100 | UBXN6 |
200 | 19 | 6419098 | 11140703 | 16 | 13 | 1.7e-14 | 7.6e-17 | NaN | NaN | CTD-2623N2.3 EVI5L INSR MARCH2 OLFM2 RAVER1 SNAPC2 XAB2 ZNF266 ZNF559 ZNF561 |
201 | 19 | 16462417 | 20451172 | 23 | 5 | 4.5e-18 | 1.6e-16 | 1.8e-01 | 97 | CTD-3032J10.3 KIAA1683 OCEL1 PGPEP1 YJEFN3 |
202 | 19 | 33164759 | 34691449 | 3 | 2 | 1.5e-09 | 1.4e-18 | 1.0e-14 | 23 | KCTD15 PEPD |
203 | 19 | 37711656 | 39396649 | 1 | 1 | 3.3e-08 | 1.5e-06 | 6.4e-05 | 31 | SIPA1L3 |
204 | 19 | 46276056 | 48406374 | 2 | 2 | 3.2e-14 | 1.2e-27 | 5.3e-15 | 48 | PNMAL1 SAE1 |
205 | 19 | 48931222 | 51224297 | 8 | 2 | 8.6e-11 | 6.9e-10 | 2.9e-01 | 97 | AP2A1 SNRNP70 |
206 | 20 | 19173950 | 21919054 | 2 | 2 | 1.4e-12 | 2.3e-13 | 1.0e+00 | 100 | PLK1S1 RIN2 |
207 | 20 | 30179027 | 31615615 | 1 | 1 | 1.2e-07 | 8.1e-06 | 4.1e-02 | 79 | KIF3B |
208 | 20 | 31884069 | 35298668 | 16 | 8 | 3.9e-14 | 1.4e-12 | NaN | NaN | CEP250 EDEM2 GGT7 LINC00657 MYH7B RALY TP53INP2 TRPC4AP |
209 | 20 | 49975801 | 52810143 | 2 | 1 | 2.0e-11 | 2.3e-16 | 1.0e-06 | 64 | ZFP64 |
210 | 20 | 61667526 | 62912463 | 2 | 1 | 7.8e-10 | 4.2e-09 | 7.2e-05 | 54 | LIME1 |
211 | 22 | 19420959 | 20330744 | 3 | 1 | 1.8e-09 | 3.4e-07 | 3.2e-02 | 82 | AC006547.14 |
212 | 22 | 20732809 | 21034809 | 1 | 1 | 3.3e-08 | 1.8e-09 | 1.3e-02 | 83 | SCARF2 |
213 | 22 | 28478985 | 32995751 | 9 | 3 | 2.0e-10 | 3.4e-10 | 6.4e-03 | 81 | DEPDC5 KREMEN1 RNF215 |
214 | 22 | 37781874 | 39355109 | 5 | 1 | 2.9e-16 | 8.4e-16 | 1.3e-02 | 90 | PLA2G6 |
215 | 22 | 40117397 | 42917154 | 22 | 8 | 1.0e-24 | 4.1e-25 | 1.0e+00 | 100 | ACO2 ADSL MKL1 PMM1 POLR3H TEF WBP2NL |
Trait | chisq ratio | # genes+ | # genes++ | % genes++ | corr | corr P | genes |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|---|---|---|---|
GTEx | Small Intestine Terminal Ileum | 26 | 5.6 | 6.5 |
GTEx | Ovary | 44 | 4.8 | 5.9 |
GTEx | Brain Frontal Cortex BA9 | 43 | 4.7 | 5.8 |
GTEx | Cells EBV-transformed lymphocytes | 60 | 4.2 | 5.6 |
GTEx | Liver | 33 | 4.6 | 5.5 |
GTEx | Spleen | 61 | 4.3 | 5.5 |
GTEx | Brain Cortex | 40 | 3.9 | 5.4 |
GTEx | Brain Putamen basal ganglia | 29 | 4.6 | 5.4 |
GTEx | Pituitary | 41 | 3.7 | 5.4 |
GTEx | Prostate | 37 | 4.4 | 5.4 |
GTEx | Uterus | 27 | 4.8 | 5.4 |
GTEx | Heart Left Ventricle | 56 | 3.7 | 5.3 |
GTEx | Stomach | 62 | 4.3 | 5.3 |
GTEx | Vagina | 24 | 3.8 | 5.3 |
GTEx | Artery Coronary | 49 | 4.1 | 5.2 |
GTEx | Brain Cerebellar Hemisphere | 61 | 4.1 | 5.2 |
GTEx | Brain Cerebellum | 65 | 3.3 | 5.2 |
GTEx | Brain Hippocampus | 20 | 3.8 | 5.2 |
GTEx | Colon Sigmoid | 58 | 4.0 | 5.2 |
GTEx | Pancreas | 52 | 3.2 | 5.2 |
GTEx | Adipose Visceral Omentum | 78 | 3.8 | 5.1 |
GTEx | Esophagus Gastroesophageal Junction | 62 | 4.3 | 5.1 |
GTEx | Heart Atrial Appendage | 63 | 4.0 | 5.1 |
GTEx | Artery Aorta | 104 | 3.5 | 5.0 |
GTEx | Esophagus Muscularis | 118 | 3.7 | 5.0 |
GTEx | Lung | 100 | 3.5 | 5.0 |
GTEx | Thyroid | 133 | 3.3 | 5.0 |
GTEx | Adipose Subcutaneous | 112 | 3.2 | 4.9 |
GTEx | Artery Tibial | 121 | 3.2 | 4.9 |
GTEx | Brain Caudate basal ganglia | 30 | 3.3 | 4.9 |
GTEx | Brain Nucleus accumbens basal ganglia | 30 | 3.5 | 4.9 |
GTEx | Breast Mammary Tissue | 66 | 3.3 | 4.9 |
GTEx | Breast Mammary Tissue (Male) | 40 | 3.4 | 4.9 |
GTEx | Testis | 112 | 3.5 | 4.9 |
ROSMAP | Brain Pre-frontal Cortex | 158 | 3.6 | 4.9 |
GTEx | Breast Mammary Tissue (Female) | 53 | 3.2 | 4.8 |
GTEx | Cells Transformed fibroblasts | 126 | 3.0 | 4.8 |
GTEx | Muscle Skeletal | 91 | 3.1 | 4.8 |
GTEx | Skin Not Sun Exposed Suprapubic | 77 | 3.1 | 4.8 |
GTEx | Adrenal Gland | 54 | 3.7 | 4.7 |
GTEx | Brain Hypothalamus | 19 | 3.2 | 4.7 |
GTEx | Colon Transverse | 63 | 3.1 | 4.7 |
GTEx | Skin Sun Exposed Lower leg | 116 | 3.2 | 4.7 |
GTEx | Whole Blood | 60 | 3.0 | 4.7 |
The Cancer Genome Atlas | Esophageal Carcinoma | 23 | 3.4 | 4.7 |
The Cancer Genome Atlas | Glioblastoma Multiforme | 36 | 3.5 | 4.7 |
The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | 33 | 3.0 | 4.7 |
GTEx | Esophagus Mucosa | 102 | 3.1 | 4.6 |
GTEx | Nerve Tibial | 129 | 3.0 | 4.6 |
The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | 39 | 3.6 | 4.6 |
The Cancer Genome Atlas | Soft Tissue Sarcoma | 34 | 3.2 | 4.6 |
The Cancer Genome Atlas | Colon Adenocarcinoma | 62 | 3.0 | 4.4 |
The Cancer Genome Atlas | Lung Adenocarcinoma | 87 | 3.0 | 4.4 |
The Cancer Genome Atlas | Bladder Urothelial Carcinoma | 42 | 2.5 | 4.3 |
The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | 106 | 2.6 | 4.3 |
The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | 61 | 3.0 | 4.3 |
The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | 69 | 2.8 | 4.3 |
The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | 38 | 2.4 | 4.3 |
The Cancer Genome Atlas | Pancreatic Adenocarcinoma | 48 | 2.9 | 4.3 |
The Cancer Genome Atlas | Rectum Adenocarcinoma | 15 | 2.2 | 4.3 |
The Cancer Genome Atlas | Stomach Adenocarcinoma | 48 | 2.9 | 4.3 |
METSIM | Adipose | 104 | 2.3 | 4.2 |
NTR | Blood | 65 | 2.7 | 4.2 |
CommonMind | Brain Pre-frontal Cortex | 139 | 2.6 | 4.2 |
The Cancer Genome Atlas | Breast Invasive Carcinoma | 126 | 2.9 | 4.2 |
The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | 68 | 2.5 | 4.2 |
The Cancer Genome Atlas | Brain Lower Grade Glioma | 107 | 2.5 | 4.2 |
The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | 40 | 3.0 | 4.2 |
The Cancer Genome Atlas | Prostate Adenocarcinoma | 127 | 2.7 | 4.2 |
The Cancer Genome Atlas | Thyroid Carcinoma | 126 | 2.4 | 4.2 |
The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | 11 | 2.2 | 4.1 |
The Cancer Genome Atlas | Skin Cutaneous Melanoma | 12 | 2.2 | 4.0 |
The Cancer Genome Atlas | Testicular Germ Cell Tumors | 25 | 2.0 | 4.0 |
YFS | Blood | 95 | 2.1 | 3.9 |