Best TWAS P=6.71e-09 · Best GWAS P=2.68e-10 conditioned to 0.000551
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Nerve Tibial | SCMH1 | 0.16 | 0.03 | enet | 24 | 0.07 | 1.6e-05 | -4.3 | 5.5 | 3.1e-08 | -0.53 | 0.31 | 0.62 | FALSE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | SCMH1 | 0.07 | 0.08 | blup | 97 | 0.07 | 2.5e-07 | -4.2 | 5.8 | 6.7e-09 | -0.62 | 0.36 | 0.64 | TRUE |