Best TWAS P=5.03e-08 · Best GWAS P=7.37e-11 conditioned to 5.62e-08
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Spleen | GIPC2 | 0.43 | 0.07 | enet | 19 | 0.22 | 2.9e-06 | -4.7 | 5.2 | 2.6e-07 | 0.21 | 0.16 | 0.81 | FALSE |
| 2 | The Cancer Genome Atlas | Colon Adenocarcinoma | GIPC2 | 0.04 | 0.01 | blup | 65 | 0.00 | 2.5e-01 | -4.2 | 5.5 | 5.0e-08 | 0.22 | 0.06 | 0.21 | TRUE |