2697 significantly associated models · 600 unique genes
.
# | chr | p0 | p1 | # assoc genes | # joint genes | best TWAS P | best SNP P | cond SNP P | % var exp | joint genes |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1 | 903104 | 3172702 | 4 | 2 | 3.3e-10 | 1.2e-08 | 1.6e-02 | 82 | RP1-283E3.4 RP3-395M20.12 |
2 | 1 | 5611729 | 7460433 | 5 | 1 | 2.2e-13 | 1.6e-14 | 1.0e+00 | 100 | THAP3 |
3 | 1 | 7715776 | 9571422 | 2 | 1 | 6.7e-12 | 2.2e-11 | 1.0e+00 | 100 | RERE |
4 | 1 | 11298790 | 12731572 | 1 | 1 | 2.6e-07 | 1.2e-06 | 1.1e-02 | 72 | PLOD1 |
5 | 1 | 23464974 | 23994201 | 1 | 1 | 2.9e-07 | 5.5e-07 | 9.3e-02 | 89 | TCEA3 |
6 | 1 | 31494475 | 32929175 | 1 | 1 | 3.5e-09 | 2.1e-11 | 1.7e-07 | 39 | BAI2 |
7 | 1 | 42153335 | 43576321 | 1 | 1 | 1.7e-08 | 1.6e-09 | 2.2e-07 | 26 | RIMKLA |
8 | 1 | 45100098 | 51180660 | 11 | 3 | 5.0e-12 | 9.3e-15 | 2.5e-04 | 78 | AGBL4 RP11-767N6.7 TAL1 |
9 | 1 | 71163715 | 73435171 | 1 | 1 | 1.1e-14 | 2.6e-20 | 3.1e-10 | 54 | NEGR1 |
10 | 1 | 77815519 | 79300939 | 1 | 1 | 5.0e-08 | 7.4e-11 | 5.6e-08 | 30 | GIPC2 |
11 | 1 | 83640176 | 85162753 | 1 | 1 | 4.6e-09 | 4.9e-09 | 4.1e-03 | 76 | TTLL7 |
12 | 1 | 88621347 | 90053563 | 1 | 1 | 1.5e-07 | 3.9e-06 | 3.4e-01 | 96 | GTF2B |
13 | 1 | 109453129 | 110834259 | 1 | 1 | 6.2e-09 | 2.9e-09 | 1.0e+00 | 100 | GNAI3 |
14 | 1 | 112312154 | 113857970 | 3 | 1 | 2.1e-08 | 9.5e-09 | 1.0e+00 | 100 | MOV10 |
15 | 1 | 114893146 | 116330558 | 2 | 1 | 2.1e-08 | 1.9e-06 | 5.1e-01 | 98 | SIKE1 |
16 | 1 | 149672809 | 151793174 | 5 | 2 | 3.5e-09 | 1.8e-08 | 1.0e+00 | 100 | RPRD2 SEMA6C |
17 | 1 | 173178453 | 175663031 | 4 | 1 | 1.7e-09 | 1.9e-08 | 1.9e-01 | 94 | RC3H1 |
18 | 1 | 177362879 | 178753162 | 1 | 1 | 1.6e-08 | 6.4e-25 | 5.1e-18 | 30 | RASAL2-AS1 |
19 | 1 | 183961643 | 185416670 | 1 | 1 | 3.1e-11 | 6.2e-09 | 4.5e-02 | 88 | EDEM3 |
20 | 1 | 201158976 | 202607593 | 3 | 1 | 2.3e-16 | 2.8e-17 | 1.4e-02 | 92 | LMOD1 |
21 | 1 | 243298257 | 243910067 | 1 | 1 | 7.1e-11 | 8.0e-11 | 3.2e-02 | 89 | SDCCAG8 |
22 | 2 | 23453834 | 26088769 | 11 | 3 | 1.1e-44 | 4.5e-39 | 7.2e-01 | 100 | ADCY3 C2orf84 POMC |
23 | 2 | 26223547 | 27649375 | 1 | 1 | 8.1e-08 | 1.0e-07 | 1.0e+00 | 100 | KCNK3 |
24 | 2 | 46599373 | 47102655 | 1 | 1 | 3.6e-08 | 9.2e-11 | 1.1e-04 | 64 | CRIPT |
25 | 2 | 47845523 | 49300234 | 2 | 1 | 1.7e-08 | 3.3e-08 | 1.9e-01 | 94 | FOXN2 |
26 | 2 | 86095201 | 87510868 | 2 | 1 | 7.9e-08 | 5.3e-08 | 1.0e-01 | 91 | RNF103 |
27 | 2 | 99468341 | 101731705 | 3 | 2 | 8.1e-12 | 4.1e-12 | 5.1e-01 | 99 | AFF3 LONRF2 |
28 | 2 | 111957073 | 113641631 | 2 | 1 | 4.8e-08 | 1.4e-06 | 7.5e-02 | 86 | MERTK |
29 | 2 | 134928375 | 137323986 | 4 | 1 | 1.1e-07 | 1.8e-08 | 8.8e-03 | 78 | LCT |
30 | 2 | 164657815 | 166396485 | 2 | 2 | 4.8e-12 | 7.9e-17 | 1.4e-03 | 85 | COBLL1 GRB14 |
31 | 2 | 174238261 | 175812508 | 1 | 1 | 4.6e-09 | 3.9e-08 | 6.7e-01 | 99 | OLA1 |
32 | 2 | 177771124 | 179175022 | 2 | 1 | 8.2e-08 | 9.3e-08 | 1.2e-01 | 92 | AC073834.3 |
33 | 2 | 187633716 | 189122229 | 2 | 1 | 1.8e-07 | 3.1e-08 | 3.8e-02 | 86 | TFPI |
34 | 2 | 203086693 | 204549680 | 1 | 1 | 5.7e-09 | 4.3e-08 | 5.1e-01 | 99 | CARF |
35 | 2 | 229929352 | 231485512 | 1 | 1 | 9.4e-09 | 2.1e-16 | 1.6e-09 | 46 | TRIP12 |
36 | 3 | 11631498 | 13169322 | 1 | 1 | 1.6e-13 | 1.5e-21 | 8.0e-10 | 58 | PPARG |
37 | 3 | 14947539 | 16385395 | 1 | 1 | 5.4e-09 | 5.4e-09 | 3.5e-01 | 97 | BTD |
38 | 3 | 35439546 | 36079910 | 1 | 1 | 2.1e-08 | 1.5e-14 | 1.0e-08 | 44 | ARPP21 |
39 | 3 | 43996504 | 45398042 | 1 | 1 | 2.1e-07 | 2.2e-12 | 9.3e-12 | 6 | ZNF35 |
40 | 3 | 48029118 | 51043528 | 26 | 6 | 5.4e-31 | 1.7e-26 | NaN | NaN | CAMKV GPX1 RNF123 SEMA3F UBA7 |
41 | 3 | 84767271 | 86367480 | 1 | 1 | 7.8e-12 | 8.4e-17 | 4.8e-07 | 63 | CADM2 |
42 | 3 | 93537290 | 94028192 | 2 | 1 | 6.5e-08 | 3.6e-12 | 3.3e-06 | 55 | ARL13B |
43 | 3 | 122756601 | 123415781 | 1 | 1 | 1.0e-07 | 3.6e-07 | 6.9e-02 | 87 | ADCY5 |
44 | 3 | 130559230 | 132702211 | 1 | 1 | 3.0e-07 | 9.6e-12 | 5.7e-08 | 36 | CPNE4 |
45 | 3 | 135842507 | 137368142 | 4 | 1 | 3.5e-11 | 2.0e-10 | 1.5e-02 | 86 | RP11-85F14.5 |
46 | 3 | 182846387 | 184238310 | 1 | 1 | 2.0e-07 | 3.4e-08 | 7.0e-03 | 76 | MAP6D1 |
47 | 4 | 69713 | 1610872 | 5 | 2 | 6.7e-12 | 1.3e-08 | 2.7e-02 | 85 | PCGF3 SLC26A1 |
48 | 4 | 2152449 | 3943984 | 6 | 3 | 2.1e-09 | 6.4e-08 | 4.3e-01 | 98 | C4orf44 NOP14 RNF4 |
49 | 4 | 17104059 | 18507692 | 2 | 1 | 3.2e-12 | 1.0e-13 | 3.0e-04 | 76 | DCAF16 |
50 | 4 | 55531875 | 56988744 | 3 | 1 | 1.6e-08 | 8.8e-10 | 4.6e-03 | 79 | TMEM165 |
51 | 4 | 67642191 | 69098006 | 1 | 1 | 3.6e-09 | 1.1e-09 | 8.1e-07 | 34 | CENPC |
52 | 4 | 77938810 | 79439935 | 1 | 1 | 9.5e-09 | 4.0e-08 | 8.5e-01 | 100 | CNOT6L |
53 | 4 | 80512228 | 81031736 | 1 | 1 | 2.4e-10 | 1.1e-10 | 5.5e-04 | 71 | GDEP |
54 | 5 | 42878849 | 44296986 | 1 | 1 | 1.3e-07 | 4.4e-07 | 8.1e-04 | 56 | NNT-AS1 |
55 | 5 | 73626450 | 75704085 | 8 | 2 | 2.3e-18 | 1.1e-18 | 4.7e-02 | 95 | ANKRD31 POC5 |
56 | 5 | 87006055 | 88677293 | 2 | 2 | 7.4e-15 | 7.9e-16 | 3.4e-07 | 60 | CTC-498M16.2 LINC00461 |
57 | 5 | 126587995 | 128220643 | 3 | 2 | 3.7e-37 | 4.7e-32 | 8.7e-01 | 100 | CTC-228N24.3 FLJ33630 |
58 | 5 | 133240927 | 134935530 | 2 | 2 | 3.3e-08 | 6.4e-06 | 3.6e-02 | 78 | SAR1B TXNDC15 |
59 | 5 | 169590807 | 171419658 | 1 | 1 | 4.0e-09 | 1.0e-08 | 2.5e-01 | 96 | RANBP17 |
60 | 6 | 24010084 | 26689223 | 4 | 3 | 1.3e-16 | 8.3e-18 | 8.0e-09 | 55 | C6orf62 LRRC16A U91328.19 |
61 | 6 | 33745071 | 36804187 | 8 | 3 | 3.6e-25 | 4.1e-20 | 2.7e-02 | 94 | ANKS1A MAPK13 UHRF1BP1 |
62 | 6 | 42285496 | 42934620 | 2 | 1 | 7.4e-08 | 7.7e-08 | 1.7e-01 | 93 | PRPH2 |
63 | 6 | 56253790 | 57687035 | 1 | 1 | 1.6e-07 | 3.9e-06 | 6.6e-04 | 46 | ZNF451 |
64 | 6 | 125970401 | 127355237 | 1 | 1 | 2.4e-10 | 1.7e-11 | 7.8e-05 | 66 | CENPW |
65 | 7 | 5925156 | 7492402 | 4 | 2 | 1.3e-09 | 1.3e-08 | 6.1e-02 | 89 | ZDHHC4 ZNF12 |
66 | 7 | 23913624 | 25432157 | 1 | 1 | 2.6e-09 | 5.0e-09 | 1.0e+00 | 100 | MPP6 |
67 | 7 | 43821453 | 45498400 | 3 | 1 | 9.6e-11 | 1.6e-13 | 4.8e-05 | 70 | ZMIZ2 |
68 | 7 | 74016979 | 75842792 | 7 | 1 | 2.5e-12 | 1.8e-11 | 1.0e+00 | 100 | PMS2L3 |
69 | 7 | 76018346 | 78108724 | 2 | 2 | 7.1e-09 | 1.9e-07 | 6.6e-01 | 99 | FAM185BP RSBN1L |
70 | 7 | 98244565 | 99827148 | 4 | 1 | 1.0e-10 | 5.2e-11 | 1.0e+00 | 100 | ZKSCAN5 |
71 | 8 | 8092025 | 10985432 | 2 | 1 | 3.9e-09 | 1.1e-08 | 1.6e-01 | 94 | MFHAS1 |
72 | 8 | 11365692 | 12751157 | 1 | 1 | 2.8e-07 | 3.0e-06 | 1.6e-02 | 74 | FAM85A |
73 | 8 | 21249296 | 22666279 | 3 | 1 | 2.3e-08 | 1.9e-08 | 1.0e+00 | 100 | AC091171.1 |
74 | 8 | 26443217 | 27866322 | 1 | 1 | 2.7e-07 | 1.1e-06 | 1.0e+00 | 100 | TRIM35 |
75 | 8 | 29996824 | 31433801 | 1 | 1 | 3.9e-11 | 4.9e-12 | 1.5e-03 | 79 | TEX15 |
76 | 8 | 59339279 | 60728159 | 1 | 1 | 4.6e-08 | 3.9e-09 | 3.2e-04 | 63 | RP11-25K19.1 |
77 | 8 | 86841229 | 88271452 | 5 | 1 | 1.3e-09 | 1.1e-09 | 8.8e-02 | 92 | FAM82B |
78 | 8 | 91866730 | 92477035 | 1 | 1 | 2.6e-08 | 1.2e-08 | 1.2e-01 | 92 | LRRC69 |
79 | 9 | 14857740 | 16758776 | 2 | 1 | 6.6e-30 | 1.2e-26 | 9.7e-02 | 98 | CCDC171 |
80 | 9 | 95502571 | 97136378 | 2 | 4 | 3.3e-14 | 2.0e-13 | 1.0e+00 | 100 | PHF2 RP11-165J3.6 |
81 | 9 | 98302535 | 99734369 | 3 | 1 | 2.6e-08 | 1.8e-08 | 1.0e+00 | 100 | HABP4 |
82 | 9 | 115320787 | 116752771 | 2 | 1 | 1.4e-09 | 4.6e-09 | 6.6e-01 | 99 | PRPF4 |
83 | 9 | 130380101 | 131772389 | 1 | 1 | 5.9e-09 | 8.3e-07 | 6.6e-02 | 86 | RP11-339B21.13 |
84 | 9 | 134038723 | 135648905 | 1 | 1 | 6.9e-08 | 5.3e-08 | 1.0e+00 | 100 | MED27 |
85 | 10 | 20372032 | 23424277 | 4 | 2 | 8.1e-22 | 1.6e-22 | 1.1e-01 | 97 | MLLT10 NEBL |
86 | 10 | 64195778 | 65606229 | 1 | 1 | 7.6e-08 | 1.1e-08 | 1.6e-05 | 43 | NRBF2 |
87 | 10 | 69617766 | 70217461 | 1 | 1 | 2.2e-08 | 3.0e-11 | 3.3e-05 | 61 | MYPN |
88 | 10 | 71736472 | 73755778 | 3 | 3 | 1.5e-08 | 1.5e-11 | 1.4e-02 | 87 | ADAMTS14 PCBD1 UNC5B |
89 | 10 | 86661963 | 88819133 | 1 | 1 | 7.0e-08 | 1.0e-08 | 2.9e-02 | 85 | GRID1 |
90 | 10 | 95379543 | 96818402 | 3 | 2 | 5.4e-08 | 2.0e-13 | 6.4e-07 | 54 | NOC3L TBC1D12 |
91 | 10 | 98916782 | 100488720 | 2 | 1 | 1.6e-10 | 1.3e-12 | 7.9e-05 | 69 | CRTAC1 |
92 | 10 | 102092067 | 103493226 | 1 | 1 | 2.6e-07 | 4.3e-05 | 7.2e-03 | 57 | SFXN3 |
93 | 10 | 113511441 | 115622375 | 2 | 1 | 7.9e-09 | 1.8e-10 | 1.0e+00 | 100 | TCF7L2 |
94 | 10 | 117894117 | 119582073 | 3 | 1 | 4.9e-11 | 1.7e-11 | 1.0e+00 | 100 | KIAA1598 |
95 | 10 | 125455780 | 126995050 | 1 | 1 | 7.6e-08 | 1.9e-06 | 2.7e-03 | 60 | LHPP |
96 | 10 | 133309117 | 135192153 | 3 | 3 | 1.8e-12 | 1.6e-12 | 1.0e+00 | 100 | DPYSL4 GPR123 STK32C |
97 | 11 | 7714238 | 11013472 | 3 | 2 | 7.1e-11 | 9.2e-12 | 2.3e-03 | 80 | SBF2 STK33 |
98 | 11 | 26818083 | 29054545 | 3 | 3 | 1.4e-18 | 5.1e-23 | 1.2e-04 | 85 | BDNF-AS LIN7C METTL15 |
99 | 11 | 42881882 | 44607471 | 3 | 1 | 2.3e-15 | 1.3e-16 | 3.7e-03 | 88 | HSD17B12 |
100 | 11 | 46180005 | 48559571 | 18 | 1 | 1.3e-25 | 2.5e-25 | 1.0e+00 | 100 | NDUFS3 |
101 | 11 | 61417472 | 61934404 | 1 | 1 | 7.5e-08 | 4.5e-07 | 1.1e-01 | 90 | RAB3IL1 |
102 | 11 | 64501991 | 66919278 | 10 | 8 | 1.0e-10 | 1.0e-13 | NaN | NaN | CNIH2 CTD-3074O7.5 FIBP KLC2 LTBP3 PACS1 SNX32 |
103 | 11 | 118205702 | 119904686 | 5 | 1 | 6.1e-11 | 7.8e-10 | 5.0e-01 | 99 | HMBS |
104 | 11 | 121830239 | 123382247 | 1 | 1 | 8.6e-12 | 2.1e-11 | 5.3e-03 | 83 | UBASH3B |
105 | 11 | 130038487 | 131476599 | 2 | 1 | 7.2e-09 | 2.1e-08 | 1.8e-01 | 94 | SNX19 |
106 | 12 | 49569311 | 50991370 | 1 | 1 | 2.4e-07 | 6.0e-16 | 4.4e-10 | 40 | FAIM2 |
107 | 12 | 89116708 | 90682621 | 2 | 1 | 2.4e-11 | 2.7e-10 | 1.0e-04 | 62 | POC1B |
108 | 12 | 107433672 | 108852590 | 2 | 1 | 2.2e-08 | 3.5e-17 | 3.3e-16 | 6 | PRDM4 |
109 | 12 | 109866528 | 111634281 | 2 | 1 | 1.0e-07 | 3.2e-07 | 1.0e+00 | 100 | IFT81 |
110 | 12 | 120976371 | 125270773 | 19 | 10 | 1.1e-18 | 1.1e-14 | 4.3e-29 | -110 | BCL7A CAMKK2 CCDC92 HIP1R KDM2B MLXIP RP11-380L11.3 RP11-380L11.4 SNRNP35 |
111 | 13 | 19552050 | 21054693 | 2 | 1 | 8.6e-10 | 2.9e-09 | 3.2e-01 | 97 | PSPC1 |
112 | 13 | 30336006 | 31886850 | 1 | 1 | 2.1e-09 | 1.1e-11 | 1.3e-03 | 78 | HMGB1 |
113 | 13 | 32305370 | 34332027 | 2 | 1 | 2.9e-08 | 3.8e-08 | 1.0e+00 | 100 | RP11-298P3.4 |
114 | 13 | 49878236 | 51982196 | 3 | 1 | 6.5e-10 | 2.8e-09 | 2.8e-01 | 97 | DLEU1 |
115 | 13 | 86121175 | 86620040 | 1 | 1 | 7.3e-09 | 2.0e-09 | 3.6e-02 | 88 | SLITRK6 |
116 | 13 | 98109395 | 99925872 | 3 | 1 | 1.1e-11 | 1.6e-12 | 4.5e-03 | 84 | FARP1 |
117 | 13 | 111270363 | 112552523 | 2 | 1 | 1.8e-09 | 1.1e-16 | 1.8e-16 | 1 | TEX29 |
118 | 14 | 50643722 | 51241489 | 1 | 1 | 1.1e-08 | 3.5e-07 | 1.7e-02 | 78 | MAP4K5 |
119 | 14 | 55888533 | 57466561 | 1 | 1 | 6.9e-08 | 6.7e-07 | 7.4e-01 | 100 | PELI2 |
120 | 14 | 59201080 | 60624289 | 1 | 1 | 8.0e-08 | 3.4e-08 | 2.0e-08 | -3 | GPR135 |
121 | 14 | 69027866 | 70518587 | 2 | 2 | 1.3e-09 | 1.2e-10 | 7.4e-02 | 92 | EXD2 GALNT16 |
122 | 14 | 74424938 | 76089054 | 4 | 1 | 1.6e-09 | 4.0e-10 | 1.0e+00 | 100 | DLST |
123 | 14 | 92286262 | 94495324 | 3 | 3 | 4.0e-10 | 3.4e-12 | 3.3e-03 | 82 | BTBD7 C14orf142 RIN3 |
124 | 14 | 102544860 | 104074810 | 1 | 2 | 2.6e-09 | 7.4e-13 | 7.2e-04 | 78 | TRAF3 |
125 | 15 | 40828922 | 42468786 | 7 | 1 | 1.3e-09 | 7.1e-10 | 6.2e-02 | 91 | OIP5-AS1 |
126 | 15 | 65940231 | 68789191 | 6 | 9 | 9.6e-16 | 1.3e-18 | NaN | NaN | IQCH MAP2K1 MAP2K5 TIPIN |
127 | 15 | 72287856 | 74291976 | 3 | 1 | 1.6e-10 | 7.7e-14 | 2.4e-05 | 68 | BBS4 |
128 | 15 | 74770334 | 75265191 | 1 | 1 | 1.6e-07 | 4.1e-09 | 5.4e-04 | 65 | CYP1A1 |
129 | 15 | 77023336 | 78474476 | 1 | 1 | 5.4e-08 | 7.7e-09 | 3.8e-04 | 62 | HMG20A |
130 | 15 | 83632164 | 85883064 | 9 | 10 | 3.4e-12 | 5.1e-18 | NaN | NaN | AC103965.1 CSPG4P11 GOLGA6L4 LOC388152 RP11-182J1.14 UBE2Q2P1 |
131 | 16 | 86671 | 1032776 | 2 | 1 | 8.7e-09 | 3.1e-08 | 1.3e-01 | 92 | PDIA2 |
132 | 16 | 3301360 | 5627737 | 2 | 2 | 1.5e-11 | 9.8e-14 | 2.5e-04 | 76 | RP11-462G12.1 UBN1 |
133 | 16 | 24162204 | 25620010 | 1 | 1 | 3.7e-11 | 9.0e-12 | 1.8e-02 | 88 | SLC5A11 |
134 | 16 | 27655848 | 31957368 | 59 | 3 | 8.8e-20 | 1.1e-17 | 6.9e-01 | 100 | EIF3C RP11-231C14.4 ZNF668 |
135 | 16 | 52828325 | 54846383 | 2 | 3 | 2.6e-22 | 4.3e-94 | 1.2e-48 | 49 | AKTIP FTO |
136 | 16 | 68467643 | 70978362 | 15 | 3 | 6.1e-17 | 6.6e-13 | 9.8e-01 | 100 | NQO1 RP11-296I10.3 TMED6 |
137 | 16 | 73788021 | 75396376 | 2 | 1 | 8.7e-09 | 6.1e-08 | 6.8e-01 | 99 | GLG1 |
138 | 17 | 629675 | 2056647 | 1 | 1 | 2.0e-07 | 7.5e-18 | 2.9e-17 | 4 | CRK |
139 | 17 | 4041725 | 6068117 | 5 | 1 | 6.5e-10 | 4.0e-08 | 2.4e-03 | 69 | AC012146.7 |
140 | 17 | 6907070 | 7410212 | 1 | 1 | 2.4e-08 | 1.5e-07 | 4.0e-02 | 85 | C17orf81 |
141 | 17 | 20350968 | 22010013 | 4 | 2 | 1.4e-12 | 1.1e-16 | 7.5e-07 | 64 | KCNJ12 TMEM11 |
142 | 17 | 27200734 | 29313078 | 8 | 1 | 6.6e-13 | 4.4e-13 | 3.0e-02 | 91 | CCDC55 |
143 | 17 | 34146026 | 35675511 | 6 | 1 | 1.5e-12 | 3.7e-12 | 1.0e+00 | 100 | GGNBP2 |
144 | 17 | 41555474 | 42998534 | 4 | 1 | 4.9e-11 | 1.4e-10 | 3.3e-01 | 98 | C17orf65 |
145 | 17 | 45271680 | 47718188 | 8 | 2 | 1.0e-11 | 1.0e-11 | 3.2e-04 | 72 | CDK5RAP3 SNF8 |
146 | 17 | 60916262 | 62694738 | 9 | 3 | 1.8e-10 | 1.6e-10 | 1.0e+00 | 100 | DCAF7 MAP3K3 STRADA |
147 | 17 | 65123352 | 66885526 | 7 | 1 | 6.3e-16 | 3.7e-16 | 1.0e+00 | 100 | C17orf58 |
148 | 17 | 73204137 | 74588633 | 1 | 1 | 2.5e-07 | 1.0e-06 | 9.2e-01 | 100 | RP11-552F3.10 |
149 | 17 | 77821891 | 80720883 | 4 | 3 | 2.0e-10 | 1.8e-10 | 2.0e-01 | 96 | BAIAP2 DUS1L RPTOR |
150 | 18 | 12090696 | 13822256 | 3 | 1 | 1.1e-09 | 1.3e-09 | 1.4e-02 | 84 | PTPN2 |
151 | 18 | 20082830 | 21863589 | 4 | 1 | 2.8e-15 | 1.5e-14 | 1.0e+00 | 100 | C18orf8 |
152 | 18 | 39287420 | 39907414 | 1 | 1 | 1.0e-07 | 2.3e-08 | 1.0e+00 | 100 | PIK3C3 |
153 | 18 | 57349900 | 58729694 | 1 | 1 | 3.0e-07 | 6.6e-26 | 7.6e-27 | -4 | MC4R |
154 | 19 | 3309021 | 5052147 | 3 | 2 | 1.5e-13 | 1.8e-17 | 4.2e-04 | 83 | MAP2K2 PIAS4 |
155 | 19 | 17473015 | 20313262 | 19 | 8 | 3.4e-18 | 1.2e-19 | 1.7e-02 | 93 | AC068499.10 CRTC1 JUND KIAA1683 MAST3 MEF2BNB SSBP4 TM6SF2 |
156 | 19 | 29606361 | 31013761 | 1 | 1 | 8.8e-09 | 2.5e-09 | 7.7e-02 | 91 | CCNE1 |
157 | 19 | 33182320 | 34691449 | 1 | 1 | 1.9e-13 | 8.9e-14 | 3.2e-02 | 92 | PEPD |
158 | 19 | 45946399 | 46439321 | 1 | 1 | 1.2e-07 | 5.6e-25 | 3.2e-19 | 25 | SNRPD2 |
159 | 20 | 24230055 | 26307797 | 9 | 8 | 1.5e-13 | 1.2e-11 | NaN | NaN | ABHD12 ENTPD6 NINL PYGB |
160 | 20 | 31981432 | 34737037 | 12 | 5 | 4.7e-11 | 1.2e-10 | 1.0e+00 | 100 | GDF5 MAP1LC3A PROCR UQCC1 |
161 | 20 | 39114404 | 40516054 | 2 | 1 | 1.8e-09 | 1.3e-10 | 1.1e-02 | 84 | ZHX3 |
162 | 20 | 46838455 | 48603940 | 5 | 1 | 1.9e-09 | 1.0e-10 | 2.3e-04 | 68 | ARFGEF2 |
163 | 20 | 49975801 | 52810143 | 2 | 1 | 6.6e-08 | 1.1e-10 | 2.9e-04 | 68 | ZFP64 |
164 | 20 | 61590782 | 62912463 | 6 | 1 | 2.0e-11 | 5.0e-11 | 1.0e+00 | 100 | LIME1 |
165 | 21 | 45583922 | 47343320 | 2 | 2 | 5.0e-08 | 3.3e-10 | 3.6e-02 | 89 | ADARB1 PTTG1IP |
166 | 22 | 17414103 | 18655860 | 1 | 1 | 3.8e-09 | 1.3e-07 | 2.8e-01 | 96 | BCL2L13 |
167 | 22 | 37528576 | 39355109 | 7 | 2 | 1.9e-10 | 1.7e-09 | 1.9e-02 | 85 | AL021977.1 ANKRD54 |
Trait | chisq ratio | # genes+ | # genes++ | % genes++ | corr | corr P | genes |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|---|---|---|---|
GTEx | Brain Cortex | 27 | 2.61 | 4.2 |
GTEx | Brain Cerebellar Hemisphere | 33 | 2.22 | 4.1 |
GTEx | Stomach | 33 | 2.27 | 4.1 |
GTEx | Brain Cerebellum | 37 | 1.87 | 4.0 |
GTEx | Lung | 61 | 2.12 | 4.0 |
GTEx | Ovary | 20 | 2.20 | 4.0 |
GTEx | Prostate | 17 | 2.04 | 4.0 |
GTEx | Skin Not Sun Exposed Suprapubic | 53 | 2.16 | 4.0 |
GTEx | Skin Sun Exposed Lower leg | 66 | 1.81 | 4.0 |
GTEx | Whole Blood | 39 | 1.96 | 4.0 |
GTEx | Adipose Subcutaneous | 66 | 1.89 | 3.9 |
GTEx | Adipose Visceral Omentum | 43 | 2.11 | 3.9 |
GTEx | Artery Aorta | 53 | 1.78 | 3.9 |
GTEx | Artery Tibial | 68 | 1.81 | 3.9 |
GTEx | Brain Caudate basal ganglia | 18 | 1.96 | 3.9 |
GTEx | Brain Frontal Cortex BA9 | 15 | 1.62 | 3.9 |
GTEx | Brain Putamen basal ganglia | 14 | 2.24 | 3.9 |
GTEx | Breast Mammary Tissue | 41 | 2.08 | 3.9 |
GTEx | Cells EBV-transformed lymphocytes | 26 | 1.83 | 3.9 |
GTEx | Esophagus Mucosa | 68 | 2.05 | 3.9 |
GTEx | Esophagus Muscularis | 72 | 2.23 | 3.9 |
GTEx | Heart Atrial Appendage | 35 | 2.22 | 3.9 |
GTEx | Heart Left Ventricle | 34 | 2.22 | 3.9 |
GTEx | Pituitary | 23 | 2.06 | 3.9 |
GTEx | Spleen | 28 | 1.98 | 3.9 |
ROSMAP | Brain Pre-frontal Cortex | 97 | 2.21 | 3.9 |
GTEx | Cells Transformed fibroblasts | 78 | 1.86 | 3.8 |
GTEx | Nerve Tibial | 77 | 1.78 | 3.8 |
GTEx | Small Intestine Terminal Ileum | 10 | 2.17 | 3.8 |
GTEx | Vagina | 11 | 1.73 | 3.8 |
The Cancer Genome Atlas | Glioblastoma Multiforme | 16 | 1.57 | 3.8 |
GTEx | Adrenal Gland | 26 | 1.78 | 3.7 |
GTEx | Brain Hypothalamus | 11 | 1.86 | 3.7 |
GTEx | Brain Nucleus accumbens basal ganglia | 24 | 2.77 | 3.7 |
GTEx | Breast Mammary Tissue (Male) | 22 | 1.84 | 3.7 |
GTEx | Colon Sigmoid | 25 | 1.71 | 3.7 |
GTEx | Colon Transverse | 40 | 1.94 | 3.7 |
GTEx | Esophagus Gastroesophageal Junction | 27 | 1.87 | 3.7 |
GTEx | Liver | 17 | 2.37 | 3.7 |
GTEx | Muscle Skeletal | 50 | 1.73 | 3.7 |
GTEx | Thyroid | 75 | 1.88 | 3.7 |
GTEx | Uterus | 9 | 1.59 | 3.7 |
GTEx | Artery Coronary | 19 | 1.61 | 3.6 |
GTEx | Breast Mammary Tissue (Female) | 26 | 1.58 | 3.6 |
GTEx | Pancreas | 31 | 1.90 | 3.6 |
GTEx | Testis | 45 | 1.43 | 3.6 |
The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | 18 | 1.64 | 3.6 |
The Cancer Genome Atlas | Colon Adenocarcinoma | 33 | 1.60 | 3.6 |
METSIM | Adipose | 67 | 1.45 | 3.5 |
CommonMind | Brain Pre-frontal Cortex | 86 | 1.60 | 3.5 |
The Cancer Genome Atlas | Esophageal Carcinoma | 14 | 2.04 | 3.5 |
The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | 40 | 1.47 | 3.5 |
The Cancer Genome Atlas | Brain Lower Grade Glioma | 76 | 1.77 | 3.5 |
The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | 17 | 1.54 | 3.5 |
The Cancer Genome Atlas | Pancreatic Adenocarcinoma | 22 | 1.32 | 3.5 |
The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | 11 | 2.17 | 3.5 |
The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | 59 | 1.44 | 3.4 |
The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | 26 | 1.27 | 3.4 |
The Cancer Genome Atlas | Lung Adenocarcinoma | 40 | 1.36 | 3.4 |
The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | 25 | 1.57 | 3.4 |
The Cancer Genome Atlas | Soft Tissue Sarcoma | 14 | 1.31 | 3.4 |
The Cancer Genome Atlas | Stomach Adenocarcinoma | 23 | 1.37 | 3.4 |
NTR | Blood | 33 | 1.37 | 3.3 |
The Cancer Genome Atlas | Bladder Urothelial Carcinoma | 26 | 1.57 | 3.3 |
The Cancer Genome Atlas | Breast Invasive Carcinoma | 59 | 1.34 | 3.3 |
The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | 30 | 1.20 | 3.3 |
The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | 21 | 1.58 | 3.3 |
The Cancer Genome Atlas | Testicular Germ Cell Tumors | 18 | 1.41 | 3.3 |
The Cancer Genome Atlas | Thyroid Carcinoma | 63 | 1.22 | 3.3 |
GTEx | Brain Hippocampus | 7 | 1.34 | 3.2 |
YFS | Blood | 66 | 1.43 | 3.2 |
The Cancer Genome Atlas | Prostate Adenocarcinoma | 63 | 1.36 | 3.2 |
The Cancer Genome Atlas | Skin Cutaneous Melanoma | 5 | 0.93 | 3.1 |
The Cancer Genome Atlas | Rectum Adenocarcinoma | 9 | 1.30 | 2.9 |