TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Leg fat-free mass (right)
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chr13:95,632,770-97,402,915
Best TWAS P=1.64e-09 · Best GWAS P=8.41e-11 conditioned to 0.000613
95.6M
95.8M
96M
96.2M
96.4M
96.6M
96.8M
97M
97.2M
97.4M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
GTEx
Skin Not Sun Exposed Suprapubic
UGGT2
0.16
0.13
enet
11
0.17
9.5e-10
-3.9
-6.0
1.6e-09
-0.64
0.63
0.37
TRUE
2
GTEx
Colon Transverse
DNAJC3
0.10
0.06
lasso
7
0.05
1.8e-03
3.8
-5.4
7.8e-08
-0.86
0.02
0.93
FALSE
1
GTEx
Adipose Visceral Omentum
UGGT2
0.09
0.03
enet
15
0.04
4.6e-03
3.2
-5.1
2.9e-07
-0.49
0.42
0.20
FALSE
4
GTEx
Small Intestine Terminal Ileum
UGGT2
0.20
0.00
enet
16
0.02
1.2e-01
-4.1
-5.1
3.0e-07
-0.63
0.08
0.33
FALSE