Best TWAS P=2.36e-08 · Best GWAS P=2.2e-07 conditioned to 0.0298
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SLCO1A2 | 0.03 | 0 | blup | 193 | 0.02 | 0.0032 | -5.1 | 5.6 | 2.4e-08 | -0.62 | 0.04 | 0.42 | TRUE |