Best TWAS P=2.36e-08 · Best GWAS P=3.38e-09 conditioned to 8.23e-06
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NTR | Blood | NRBF2 | 0.03 | 0.01 | bslmm | 386 | 0.01 | 3.4e-05 | -3.2 | -5.6 | 2.4e-08 | 0.30 | 0.19 | 0.08 | TRUE |
2 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | NRBF2 | 0.10 | 0.06 | lasso | 7 | 0.08 | 3.5e-09 | 5.0 | 5.2 | 2.6e-07 | -0.44 | 0.21 | 0.78 | FALSE |